Information for 16-GACTGGAGCCAA (Motif 19)


Reverse Opposite:

p-value:1e-124
log p-value:-2.859e+02
Information Content per bp:1.680
Number of Target Sequences with motif4299.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif2894.5
Percentage of Background Sequences with motif2.89%
Average Position of motif in Targets99.5 +/- 53.6bp
Average Position of motif in Background98.3 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GACTGGAGCCAA-
----CGTGCCAAG

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:GACTGGAGCCAA
------TGCCAA

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GACTGGAGCCAA
GRTGMTRGAGCC--

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GACTGGAGCCAA---
NNNNTTGGCGCCGANNN

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GACTGGAGCCAA-
-TTTGGCGCCAAA

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACTGGAGCCAA----
CCTTCGGCGCCAAAAGG

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GACTGGAGCCAA
---CGGAGC---

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GACTGGAGCCAA---
---ACTAGCCAATCA

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GACTGGAGCCAA
-----CAGCC--

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GACTGGAGCCAA--
----GGTGCCAAGT