Information for 15-CAGTATTCAG (Motif 14)


Reverse Opposite:

p-value:1e-348
log p-value:-8.025e+02
Information Content per bp:1.616
Number of Target Sequences with motif27799.0
Percentage of Target Sequences with motif27.32%
Number of Background Sequences with motif22000.5
Percentage of Background Sequences with motif22.00%
Average Position of motif in Targets100.9 +/- 56.5bp
Average Position of motif in Background100.6 +/- 62.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAGTATTCAG------
--ACATTCATGACACG

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAGTATTCAG
GAATATTCAT

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGTATTCAG-----
GACCACATTCATACAAT

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGTATTCAG-
-TGGTTTCAGT

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGTATTCAG
GHATATKCAT

POL002.1_INR/Jaspar

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CAGTATTCAG----
------TCAGTCTT

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGTATTCAG
TCATCAATCA-

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGTATTCAG
ATGCATAATTCA-

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAGTATTCAG---
CGAACAGTGCTCACTAT

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTATTCAG
CTCATGAATATTCAT