Information for 17-SAGTGTGT (Motif 13)


Reverse Opposite:

p-value:1e-362
log p-value:-8.337e+02
Information Content per bp:1.695
Number of Target Sequences with motif34218.0
Percentage of Target Sequences with motif33.63%
Number of Background Sequences with motif27804.5
Percentage of Background Sequences with motif27.80%
Average Position of motif in Targets100.4 +/- 57.0bp
Average Position of motif in Background100.4 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----SAGTGTGT---
NNNCCATTGTGTNAN

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--SAGTGTGT------
NNGCGTGTGTGCNGCN

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:SAGTGTGT--
-ATTGTTTAN

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:SAGTGTGT
-ATTGTT-

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:SAGTGTGT
-ATTGTTA

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:SAGTGTGT----------
-NSTGTTTRCWCAGBNNN

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:SAGTGTGT--
--TTGTTTAC

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:SAGTGTGT---
TATTGTTTATT

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--SAGTGTGT
TTRAGTGSYK

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--SAGTGTGT
NCCATTGTTY