Information for 14-ACTGACTGGC (Motif 12)


Reverse Opposite:

p-value:1e-367
log p-value:-8.457e+02
Information Content per bp:1.445
Number of Target Sequences with motif26459.0
Percentage of Target Sequences with motif26.01%
Number of Background Sequences with motif20651.0
Percentage of Background Sequences with motif20.65%
Average Position of motif in Targets100.1 +/- 56.2bp
Average Position of motif in Background101.4 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ACTGACTGGC---
-BTGABTGACAGS

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACTGACTGGC------
-CTGATTGGTCNATTT

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACTGACTGGC----
--TGATTGGCTANN

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACTGACTGGC-
-CCGATTGGCT

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACTGACTGGC
TGAGTGACAGSC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACTGACTGGC
-CTGTCTGG-

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACTGACTGGC-----
CAATCACTGGCAGAAT

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACTGACTGGC---
-NTGATTGACAGN

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACTGACTGGC----
NNTNNTGTCTGGNNTNG

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACTGACTGGC---
AGAGTGCTGATTGGTCCA