Information for 12-AGCKSCCTTT (Motif 10)


Reverse Opposite:

p-value:1e-383
log p-value:-8.832e+02
Information Content per bp:1.604
Number of Target Sequences with motif19611.0
Percentage of Target Sequences with motif19.28%
Number of Background Sequences with motif14461.4
Percentage of Background Sequences with motif14.46%
Average Position of motif in Targets100.6 +/- 55.9bp
Average Position of motif in Background100.5 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F3/MA0469.2/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AGCKSCCTTT--
AAAAATGGCGCCATTTTT

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCKSCCTTT
NGCTN-----

E2F2/MA0864.1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGCKSCCTTT-
AAAATGGCGCCATTTT

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCKSCCTTT
GGCGCGCT--

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCKSCCTTT
-GCTCCG---

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGCKSCCTTT-
ANCGCGCGCCCTTNN

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCKSCCTTT--
AGGVNCCTTTGT

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGCKSCCTTT
NNGCAGCTGTC---

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGCKSCCTTT
NNAGCAGCTGCT---

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGCKSCCTTT-
NTCGCGCGCCTTNNN