Information for 9-CTATTTYNRG (Motif 9)


Reverse Opposite:

p-value:1e-517
log p-value:-1.191e+03
Information Content per bp:1.535
Number of Target Sequences with motif11228.0
Percentage of Target Sequences with motif10.83%
Number of Background Sequences with motif6872.7
Percentage of Background Sequences with motif6.73%
Average Position of motif in Targets100.5 +/- 55.5bp
Average Position of motif in Background100.6 +/- 56.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-CTATTTYNRG-
GCTATTTTTGGM

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CTATTTYNRG
CTATTTTTGG

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTYNRG-
KCTATTTTTRGH

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--CTATTTYNRG---
TTCTATTTTTAGNNN

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CTATTTYNRG-
GCTATTTTTAGC

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTYNRG-
TCTATTTTTAGA

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTYNRG-
TCTATTTATAGN

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTATTTYNRG
CCATATATGG

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTYNRG-
GCTATTTATAGC

Dlx1/MA0879.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTYNRG
NNTAATTANN-