Information for 6-ARAAGCCW (Motif 7)


Reverse Opposite:

p-value:1e-663
log p-value:-1.527e+03
Information Content per bp:1.603
Number of Target Sequences with motif67873.0
Percentage of Target Sequences with motif65.47%
Number of Background Sequences with motif58290.7
Percentage of Background Sequences with motif57.07%
Average Position of motif in Targets99.8 +/- 56.6bp
Average Position of motif in Background99.8 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ARAAGCCW
NGAAGC--

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ARAAGCCW
--CAGCC-

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ARAAGCCW-
--AAGCTTG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ARAAGCCW-
-BCAGACWA

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ARAAGCCW-
AAAAGTCAA

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ARAAGCCW
CCAACTGCCA

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ARAAGCCW
CACAGN--

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ARAAGCCW--
-CGTGCCAAG

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ARAAGCCW
YAACBGCC-

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ARAAGCCW-
---TGCCAA