Information for 5-CATWTGST (Motif 6)


Reverse Opposite:

p-value:1e-664
log p-value:-1.531e+03
Information Content per bp:1.724
Number of Target Sequences with motif27867.0
Percentage of Target Sequences with motif26.88%
Number of Background Sequences with motif20192.0
Percentage of Background Sequences with motif19.77%
Average Position of motif in Targets99.8 +/- 56.2bp
Average Position of motif in Background100.8 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CATWTGST
ACATATGG-

Atoh1/MA0461.2/Jaspar

Match Rank:2
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CATWTGST
ANCATATGTT

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CATWTGST
AACAKATGGY

BHLHE22/MA0818.1/Jaspar

Match Rank:4
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CATWTGST
ANCATATGGT

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CATWTGST
ACCATATGGC

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CATWTGST
ACCATATGGT

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CATWTGST
NACATATGGN

OLIG3/MA0827.1/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CATWTGST
ANCATATGGT

OLIG2/MA0678.1/Jaspar

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CATWTGST
ACCATATGGT

OLIG1/MA0826.1/Jaspar

Match Rank:10
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CATWTGST
AACATATGTT