Information for 24-CTAAACCTAACC (Motif 25)


Reverse Opposite:

p-value:1e-12
log p-value:-2.891e+01
Information Content per bp:1.826
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.02%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.1 +/- 54.0bp
Average Position of motif in Background133.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)4.78
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF8/MA0652.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTAAACCTAACC-
TCGAAACCGAAACT

IRF9/MA0653.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTAAACCTAACC-
AACGAAACCGAAACT

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTAAACCTAACC
GCTAATCC-----

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTAAACCTAACC
CTTAATCCC----

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTAAACCTAACC
-TAATCCCN---

Dmbx1/MA0883.1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTAAACCTAACC-
NNNATTAATCCGNTTNA

PH0025.1_Dmbx1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTAAACCTAACC-
NNNATTAATCCGNTTNA

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTAAACCTAACC
YTAATCCY----

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTAAACCTAACC
NYTAATCCYB---

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTAAACCTAACC
TTAATCCC----