Information for 22-ATCAACCCGA (Motif 23)


Reverse Opposite:

p-value:1e-33
log p-value:-7.663e+01
Information Content per bp:1.975
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.3 +/- 54.9bp
Average Position of motif in Background52.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------ATCAACCCGA
TNAGNTGATCAACCGGT

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCAACCCGA
CCATCAATCAAA

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATCAACCCGA
CCAATCAA-----

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATCAACCCGA
ATTAAA----

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATCAACCCGA
ATCACCCCAT

ETV2/MA0762.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ATCAACCCGA----
---AACCGGAAATA

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------ATCAACCCGA
CGACCCAATCAACGGTG

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATCAACCCGA--
GAAGATCAATCACTAA

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATCAACCCGA--
GAAGATCAATCACTTA

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATCAACCCGA
GGCCATTAAC----