Information for 23-YRGCTCCA (Motif 17)


Reverse Opposite:

p-value:1e-107
log p-value:-2.465e+02
Information Content per bp:1.546
Number of Target Sequences with motif18323.0
Percentage of Target Sequences with motif17.67%
Number of Background Sequences with motif15490.8
Percentage of Background Sequences with motif15.17%
Average Position of motif in Targets100.1 +/- 56.1bp
Average Position of motif in Background101.0 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:forward strand
Alignment:YRGCTCCA
--GCTCCG

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----YRGCTCCA-----
CCTTCGGCGCCAAAAGG

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----YRGCTCCA-----
AGCTCGGCGCCAAAAGC

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:YRGCTCCA-----
-GGCTCYAKCAYC

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:YRGCTCCA
-NGCTN--

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:YRGCTCCA
--GCTTCC

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--YRGCTCCA--
TTTGGCGCCAAA

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:YRGCTCCA-
---ATCCAC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--YRGCTCCA
CNGTCCTCCC

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----YRGCTCCA-----
TACGCCCCGCCACTCTG