Information for 20-GATTTAGCAC (Motif 16)


Reverse Opposite:

p-value:1e-225
log p-value:-5.190e+02
Information Content per bp:1.598
Number of Target Sequences with motif17858.0
Percentage of Target Sequences with motif17.22%
Number of Background Sequences with motif13976.5
Percentage of Background Sequences with motif13.68%
Average Position of motif in Targets100.1 +/- 56.5bp
Average Position of motif in Background100.5 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GATTTAGCAC-
-NNTTGGCANN

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GATTTAGCAC-
--NTTGGCANN

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GATTTAGCAC
---TTGGCA-

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GATTTAGCAC--
--ATTAACACCT

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GATTTAGCAC-
BTVATTWGCATA

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATTTAGCAC-----
NNGATCTAGAACCTNNN

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATTTAGCAC
NNCAATTANN--

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATTTAGCAC-
-ATTTTCCATT

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GATTTAGCAC
CNGTGATTTN----

PB0194.1_Zbtb12_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATTTAGCAC---
TATCATTAGAACGCT