Information for 16-TGTTCCNAAA (Motif 14)


Reverse Opposite:

p-value:1e-244
log p-value:-5.628e+02
Information Content per bp:1.599
Number of Target Sequences with motif20607.0
Percentage of Target Sequences with motif19.88%
Number of Background Sequences with motif16298.1
Percentage of Background Sequences with motif15.96%
Average Position of motif in Targets100.0 +/- 56.4bp
Average Position of motif in Background98.6 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TGTTCCNAAA
CTGTTCCTGG-

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGTTCCNAAA
TKCTGTTCCA---

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGTTCCNAAA
TTTTCCA---

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGTTCCNAAA----
GGTTCCNNAATTTG

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TGTTCCNAAA
AANTTATTGTTCTNNA-

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTTCCNAAA-
ATTTCCAAGAA

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TGTTCCNAAA
NNTTTATTGTTCTNNN-

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGTTCCNAAA
TAATTGTTCTAAAC

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTTCCNAAA
HTTTCCCASG

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGTTCCNAAA---
-TTTCTNAGAAAN