![[ICO]](/icons/blank.gif){kind=icon}
![[PARENTDIR]](/icons/back.gif){kind=icon}
![[DIR]](/icons/folder.gif){kind=icon}
![[TXT]](/icons/text.gif){kind=icon}
![[ ]](/icons/compressed.gif){kind=icon}
![[ ]](/icons/unknown.gif){kind=icon}
| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| splits/ | 2024-09-10 22:13 | - | |
| scAnnot-to-chrombpnet/ | 2024-12-20 01:03 | - | |
| process_gencode_annotations.sh | 2024-11-07 02:24 | 370 | |
| motifs.meme.txt | 2024-09-10 22:12 | 1.1M | |
| hg38.fa.gz | 2024-09-10 22:12 | 833M | |
| hg38.fa.fai | 2024-09-10 22:12 | 7.6K | |
| hg38.fa | 2024-09-10 22:12 | 2.9G | |
| hg38.chrom.subset.sizes | 2024-09-10 22:11 | 365 | |
| hg38.chrom.sizes | 2024-09-10 22:12 | 11K | |
| gencode.v47.annotation.sorted.gtf.gz | 2024-11-07 02:25 | 75M | |
| gencode.v47.annotation.gtf.gz | 2024-11-06 20:33 | 56M | |
| data_preprocessing.ipynb | 2025-07-29 22:31 | 28K | |
| clusters.csv | 2024-12-20 15:14 | 101 | |
| chrombpnet_data_preprocessing.sh | 2025-06-10 22:17 | 1.8K | |
| chrombpnet_data_preprocessing | 2024-09-17 18:33 | 0 | |
| cells_samples_clusters.csv | 2024-09-10 22:11 | 4.6M | |
| blacklist_extended.bed | 2024-09-10 22:12 | 21K | |
| blacklist.bed.gz | 2024-09-10 22:12 | 8.0K | |
| atac_peaks_by_cluster/ | 2024-09-17 18:34 | - | |
| atac_fragments_by_cluster/ | 2024-09-17 18:32 | - | |
| ENCODE_cCRE_all.bed.gz.tbi | 2024-11-08 05:43 | 740K | |
| ENCODE_cCRE_all.bed.gz | 2024-11-08 05:42 | 32M | |