Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.4.0
(required by: htslib/1.16)
-------------------------------------------------------------------------------




The following have been reloaded with a version change:
  1) curl/8.4.0 => curl/8.17.0     2) openssl/3.0.7 => openssl/3.6.0

2025-11-17 16:26:57.334152: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:28:39.029888: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set
2025-11-17 16:28:39.065135: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1
2025-11-17 16:28:39.112211: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:89:00.0 name: NVIDIA GeForce RTX 2080 Ti computeCapability: 7.5
coreClock: 1.545GHz coreCount: 68 deviceMemorySize: 10.75GiB deviceMemoryBandwidth: 573.69GiB/s
2025-11-17 16:28:39.112374: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:28:39.715805: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2025-11-17 16:28:39.715964: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2025-11-17 16:28:40.058582: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2025-11-17 16:28:40.628171: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2025-11-17 16:28:41.282046: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2025-11-17 16:28:41.433249: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2025-11-17 16:28:41.641827: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2025-11-17 16:28:41.643045: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2025-11-17 16:28:41.643767: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2025-11-17 16:28:41.646936: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set
2025-11-17 16:28:41.647851: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:89:00.0 name: NVIDIA GeForce RTX 2080 Ti computeCapability: 7.5
coreClock: 1.545GHz coreCount: 68 deviceMemorySize: 10.75GiB deviceMemoryBandwidth: 573.69GiB/s
2025-11-17 16:28:41.647926: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:28:41.647976: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2025-11-17 16:28:41.648008: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2025-11-17 16:28:41.648040: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2025-11-17 16:28:41.648071: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2025-11-17 16:28:41.648101: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2025-11-17 16:28:41.648132: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2025-11-17 16:28:41.648189: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2025-11-17 16:28:41.649210: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2025-11-17 16:28:41.649283: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:28:44.305828: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix:
2025-11-17 16:28:44.305927: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267]      0 
2025-11-17 16:28:44.305943: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0:   N 
2025-11-17 16:28:44.307203: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10064 MB memory) -> physical GPU (device: 0, name: NVIDIA GeForce RTX 2080 Ti, pci bus id: 0000:89:00.0, compute capability: 7.5)
2025-11-17 16:29:08.164126: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2)
2025-11-17 16:29:08.164996: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2499970000 Hz
2025-11-17 16:29:09.602971: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2025-11-17 16:29:11.302247: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2025-11-17 16:29:11.312135: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2025-11-17 16:29:24.614178: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256
2025-11-17 16:29:24.673167: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: 
Relying on driver to perform ptx compilation. 
Modify $PATH to customize ptxas location.
This message will be only logged once.
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates', 'jitters', 'index', 'status', 'rev_comp'] which did not match any model input. They will be ignored by the model.
  [n for n in tensors.keys() if n not in ref_input_names])
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates'] which did not match any model input. They will be ignored by the model.
  [n for n in tensors.keys() if n not in ref_input_names])
2025-11-17 16:32:07.086749: W tensorflow/python/util/util.cc:348] Sets are not currently considered sequences, but this may change in the future, so consider avoiding using them.
2025-11-17 16:32:12.463494: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:32:24.385170: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set
2025-11-17 16:32:24.386229: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1
2025-11-17 16:32:24.414055: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:89:00.0 name: NVIDIA GeForce RTX 2080 Ti computeCapability: 7.5
coreClock: 1.545GHz coreCount: 68 deviceMemorySize: 10.75GiB deviceMemoryBandwidth: 573.69GiB/s
2025-11-17 16:32:24.414190: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:32:24.420944: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2025-11-17 16:32:24.421022: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2025-11-17 16:32:24.424190: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2025-11-17 16:32:24.426002: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2025-11-17 16:32:24.430486: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2025-11-17 16:32:24.432595: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2025-11-17 16:32:24.434272: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2025-11-17 16:32:24.435240: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2025-11-17 16:32:24.435635: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2025-11-17 16:32:24.438090: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set
2025-11-17 16:32:24.438629: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:89:00.0 name: NVIDIA GeForce RTX 2080 Ti computeCapability: 7.5
coreClock: 1.545GHz coreCount: 68 deviceMemorySize: 10.75GiB deviceMemoryBandwidth: 573.69GiB/s
2025-11-17 16:32:24.438674: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:32:24.438703: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2025-11-17 16:32:24.438729: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2025-11-17 16:32:24.438752: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2025-11-17 16:32:24.438776: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2025-11-17 16:32:24.438800: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2025-11-17 16:32:24.438834: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2025-11-17 16:32:24.438860: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2025-11-17 16:32:24.439670: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2025-11-17 16:32:24.439724: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:32:24.894483: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix:
2025-11-17 16:32:24.894634: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267]      0 
2025-11-17 16:32:24.894648: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0:   N 
2025-11-17 16:32:24.896080: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10064 MB memory) -> physical GPU (device: 0, name: NVIDIA GeForce RTX 2080 Ti, pci bus id: 0000:89:00.0, compute capability: 7.5)
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors.
  , UserWarning)
batch:   0%|          | 0/16 [00:00<?, ?it/s]2025-11-17 16:32:26.424228: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2)
2025-11-17 16:32:26.424799: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2499970000 Hz
2025-11-17 16:32:26.666188: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2025-11-17 16:32:27.023772: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2025-11-17 16:32:27.025977: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2025-11-17 16:32:28.323367: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256
2025-11-17 16:32:28.386352: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: 
Relying on driver to perform ptx compilation. 
Modify $PATH to customize ptxas location.
This message will be only logged once.
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates', 'true_profiles', 'true_logcounts', 'rev_comp'] which did not match any model input. They will be ignored by the model.
  [n for n in tensors.keys() if n not in ref_input_names])
batch:   6%|▋         | 1/16 [00:17<04:19, 17.32s/it]batch:  12%|█▎        | 2/16 [00:17<01:42,  7.32s/it]batch:  19%|█▉        | 3/16 [00:17<00:53,  4.12s/it]batch:  25%|██▌       | 4/16 [00:18<00:31,  2.62s/it]batch:  31%|███▏      | 5/16 [00:18<00:19,  1.79s/it]batch:  38%|███▊      | 6/16 [00:18<00:12,  1.29s/it]batch:  44%|████▍     | 7/16 [00:19<00:08,  1.03it/s]batch:  50%|█████     | 8/16 [00:19<00:06,  1.32it/s]batch:  56%|█████▋    | 9/16 [00:19<00:04,  1.62it/s]batch:  62%|██████▎   | 10/16 [00:20<00:03,  1.92it/s]batch:  69%|██████▉   | 11/16 [00:20<00:02,  2.19it/s]batch:  75%|███████▌  | 12/16 [00:20<00:01,  2.43it/s]batch:  81%|████████▏ | 13/16 [00:21<00:01,  2.64it/s]batch:  88%|████████▊ | 14/16 [00:21<00:00,  2.81it/s]batch:  94%|█████████▍| 15/16 [00:21<00:00,  2.92it/s]batch: 100%|██████████| 16/16 [00:21<00:00,  1.36s/it]
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2025-11-17 16:33:09.888995: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:33:52.023311: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set
2025-11-17 16:33:52.055153: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1
2025-11-17 16:33:52.095809: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:89:00.0 name: NVIDIA GeForce RTX 2080 Ti computeCapability: 7.5
coreClock: 1.545GHz coreCount: 68 deviceMemorySize: 10.75GiB deviceMemoryBandwidth: 573.69GiB/s
2025-11-17 16:33:52.095985: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:33:52.116675: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2025-11-17 16:33:52.116800: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2025-11-17 16:33:52.124804: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2025-11-17 16:33:52.131543: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2025-11-17 16:33:52.141179: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2025-11-17 16:33:52.146961: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2025-11-17 16:33:52.155008: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2025-11-17 16:33:52.156015: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2025-11-17 16:33:52.156595: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2025-11-17 16:33:52.159430: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set
2025-11-17 16:33:52.160131: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:89:00.0 name: NVIDIA GeForce RTX 2080 Ti computeCapability: 7.5
coreClock: 1.545GHz coreCount: 68 deviceMemorySize: 10.75GiB deviceMemoryBandwidth: 573.69GiB/s
2025-11-17 16:33:52.160217: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:33:52.160269: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2025-11-17 16:33:52.160316: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2025-11-17 16:33:52.160362: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2025-11-17 16:33:52.160406: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2025-11-17 16:33:52.160451: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2025-11-17 16:33:52.160495: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2025-11-17 16:33:52.160539: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2025-11-17 16:33:52.161603: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2025-11-17 16:33:52.161695: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2025-11-17 16:33:52.614205: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix:
2025-11-17 16:33:52.614301: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267]      0 
2025-11-17 16:33:52.614331: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0:   N 
2025-11-17 16:33:52.615647: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 10064 MB memory) -> physical GPU (device: 0, name: NVIDIA GeForce RTX 2080 Ti, pci bus id: 0000:89:00.0, compute capability: 7.5)
2025-11-17 16:33:52.664466: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:196] None of the MLIR optimization passes are enabled (registered 0 passes)
2025-11-17 16:33:52.682652: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2499970000 Hz
2025-11-17 16:33:54.164358: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2025-11-17 16:33:54.521985: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2025-11-17 16:33:54.527155: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2025-11-17 16:33:55.814792: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256
2025-11-17 16:33:57.307696: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: 
Relying on driver to perform ptx compilation. 
Modify $PATH to customize ptxas location.
This message will be only logged once.
RuntimeError: module compiled against API version 0xe but this version of numpy is 0xd
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors.
  , UserWarning)
