Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.4.0
(required by: htslib/1.16)
-------------------------------------------------------------------------------



Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.17.0
(required by: ucsc-utils/v489), openssl/3.0.7 (required by: curl/8.4.0)
-------------------------------------------------------------------------------




The following have been reloaded with a version change:
  1) curl/8.17.0 => curl/8.4.0

Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.4.0
(required by: htslib/1.16)
-------------------------------------------------------------------------------




The following have been reloaded with a version change:
  1) curl/8.4.0 => curl/8.17.0

2026-07-10 14:50:14.425123: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Process Process-1:
Traceback (most recent call last):
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/multiprocessing/process.py", line 297, in _bootstrap
    self.run()
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/multiprocessing/process.py", line 99, in run
    self._target(*self._args, **self._kwargs)
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/train/training.py", line 321, in train_and_validate
    background_weight=mnll_loss_background_sample_weight)
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/generators/generators.py", line 922, in __init__
    background_weight, set_bias_as_zero)
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/generators/generators.py", line 364, in __init__
    self._trim_samples()
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/generators/generators.py", line 426, in _trim_samples
    "'batch_size'".format(self._batch_size, self._num_threads))
bpnet.utils.exceptionhandler.NoTracebackException: Your data does not have enough samples to generate batches of size 1 across 1 threads. Either reduce 'threads' or 'batch_size'
2026-07-10 14:50:58.478629: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Traceback (most recent call last):
  File "/home/users/shouvikm/miniconda3/envs/bpnet/bin/bpnet-predict", line 8, in <module>
    sys.exit(predict_main())
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/cli/predict.py", line 918, in predict_main
    predict(args, pred_dir)
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/cli/predict.py", line 380, in predict
    model = load_model(args.model)
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/saving/save.py", line 211, in load_model
    loader_impl.parse_saved_model(filepath)
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/saved_model/loader_impl.py", line 114, in parse_saved_model
    constants.SAVED_MODEL_FILENAME_PB))
OSError: SavedModel file does not exist at: models/SKNO-1_RUNX1-ETO/fold_3/model_split000/{saved_model.pbtxt|saved_model.pb}
2026-07-10 14:51:40.703265: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
RuntimeError: module compiled against API version 0xe but this version of numpy is 0xd
File models/SKNO-1_RUNX1-ETO/fold_3/model_split000 does not exist