Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.4.0
(required by: htslib/1.16)
-------------------------------------------------------------------------------



Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.17.0
(required by: ucsc-utils/v489), openssl/3.0.7 (required by: curl/8.4.0)
-------------------------------------------------------------------------------




The following have been reloaded with a version change:
  1) curl/8.17.0 => curl/8.4.0

Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.4.0
(required by: htslib/1.16)
-------------------------------------------------------------------------------




The following have been reloaded with a version change:
  1) curl/8.4.0 => curl/8.17.0

2026-07-10 15:03:36.580118: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:06:41.072353: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 15:06:41.081020: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1
2026-07-10 15:06:41.120604: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:03:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 15:06:41.120711: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:06:41.139706: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:06:41.139805: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:06:41.148017: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 15:06:41.154988: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 15:06:41.165418: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 15:06:41.173917: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 15:06:41.181955: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:06:41.182560: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 15:06:41.183158: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2026-07-10 15:06:41.183292: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 15:06:41.183936: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:03:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 15:06:41.184034: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:06:41.184092: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:06:41.184141: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:06:41.184217: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 15:06:41.184275: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 15:06:41.184320: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 15:06:41.184395: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 15:06:41.184441: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:06:41.187361: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 15:06:41.187473: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:06:41.836185: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix:
2026-07-10 15:06:41.836301: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267]      0 
2026-07-10 15:06:41.836324: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0:   N 
2026-07-10 15:06:41.848180: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 11209 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN Xp, pci bus id: 0000:03:00.0, compute capability: 6.1)
2026-07-10 15:06:45.467286: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2)
2026-07-10 15:06:45.467944: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2399990000 Hz
2026-07-10 15:06:47.764030: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:06:48.035758: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:06:48.043937: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:06:49.026556: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256
2026-07-10 15:06:49.095478: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: 
Relying on driver to perform ptx compilation. 
Modify $PATH to customize ptxas location.
This message will be only logged once.
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates', 'jitters', 'index', 'status', 'rev_comp'] which did not match any model input. They will be ignored by the model.
  [n for n in tensors.keys() if n not in ref_input_names])
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates'] which did not match any model input. They will be ignored by the model.
  [n for n in tensors.keys() if n not in ref_input_names])
2026-07-10 15:10:55.918659: W tensorflow/python/util/util.cc:348] Sets are not currently considered sequences, but this may change in the future, so consider avoiding using them.
2026-07-10 15:11:00.878902: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:12:11.965900: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 15:12:11.973205: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1
2026-07-10 15:12:12.013202: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:03:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 15:12:12.013296: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:12:12.029785: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:12:12.029848: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:12:12.038861: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 15:12:12.047554: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 15:12:12.058499: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 15:12:12.067023: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 15:12:12.074470: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:12:12.074973: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 15:12:12.075393: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2026-07-10 15:12:12.075529: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 15:12:12.076263: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:03:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 15:12:12.076389: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:12:12.076458: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:12:12.076516: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:12:12.076572: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 15:12:12.076627: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 15:12:12.076681: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 15:12:12.076736: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 15:12:12.076799: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:12:12.077584: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 15:12:12.077680: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:12:12.706893: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix:
2026-07-10 15:12:12.707014: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267]      0 
2026-07-10 15:12:12.707038: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0:   N 
2026-07-10 15:12:12.708087: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 11209 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN Xp, pci bus id: 0000:03:00.0, compute capability: 6.1)
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors.
  , UserWarning)
batch:   0%|          | 0/14 [00:00<?, ?it/s]2026-07-10 15:12:15.096256: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2)
2026-07-10 15:12:15.096949: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2399990000 Hz
2026-07-10 15:12:15.828285: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:12:16.393386: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:12:16.395233: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:12:17.668522: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256
2026-07-10 15:12:17.750388: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: 
Relying on driver to perform ptx compilation. 
Modify $PATH to customize ptxas location.
This message will be only logged once.
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates', 'true_profiles', 'true_logcounts', 'rev_comp'] which did not match any model input. They will be ignored by the model.
  [n for n in tensors.keys() if n not in ref_input_names])
batch:   7%|▋         | 1/14 [00:27<06:03, 27.99s/it]batch:  14%|█▍        | 2/14 [00:28<02:21, 11.76s/it]batch:  21%|██▏       | 3/14 [00:28<01:12,  6.57s/it]batch:  29%|██▊       | 4/14 [00:29<00:41,  4.14s/it]batch:  36%|███▌      | 5/14 [00:29<00:25,  2.80s/it]batch:  43%|████▎     | 6/14 [00:29<00:15,  1.98s/it]batch:  50%|█████     | 7/14 [00:30<00:10,  1.47s/it]batch:  57%|█████▋    | 8/14 [00:30<00:06,  1.12s/it]batch:  64%|██████▍   | 9/14 [00:31<00:04,  1.12it/s]batch:  71%|███████▏  | 10/14 [00:31<00:02,  1.36it/s]batch:  79%|███████▊  | 11/14 [00:31<00:01,  1.57it/s]batch:  86%|████████▌ | 12/14 [00:32<00:01,  1.79it/s]batch:  93%|█████████▎| 13/14 [00:32<00:00,  2.03it/s]batch: 100%|██████████| 14/14 [00:33<00:00,  2.12it/s]batch: 100%|██████████| 14/14 [00:33<00:00,  2.37s/it]
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2026-07-10 15:14:19.339949: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:15:14.157839: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 15:15:14.165454: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1
2026-07-10 15:15:14.199014: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:03:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 15:15:14.199111: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:15:14.209998: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:15:14.210069: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:15:14.214220: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 15:15:14.217496: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 15:15:14.224058: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 15:15:14.229073: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 15:15:14.233329: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:15:14.234012: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 15:15:14.234536: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2026-07-10 15:15:14.234672: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 15:15:14.235069: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:03:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 15:15:14.235127: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:15:14.235168: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:15:14.235204: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:15:14.235238: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 15:15:14.235288: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 15:15:14.235322: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 15:15:14.235381: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 15:15:14.235417: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:15:14.235878: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 15:15:14.235935: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:15:14.835815: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix:
2026-07-10 15:15:14.835921: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267]      0 
2026-07-10 15:15:14.835943: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0:   N 
2026-07-10 15:15:14.839485: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 11209 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN Xp, pci bus id: 0000:03:00.0, compute capability: 6.1)
2026-07-10 15:15:14.905999: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:196] None of the MLIR optimization passes are enabled (registered 0 passes)
2026-07-10 15:15:14.924962: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2399990000 Hz
2026-07-10 15:15:16.696946: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:15:16.971953: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:15:16.977692: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:15:17.916495: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256
2026-07-10 15:15:18.004543: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: 
Relying on driver to perform ptx compilation. 
Modify $PATH to customize ptxas location.
This message will be only logged once.
RuntimeError: module compiled against API version 0xe but this version of numpy is 0xd
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors.
  , UserWarning)
