Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: curl/8.4.0 (required by: htslib/1.16) ------------------------------------------------------------------------------- Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: curl/8.17.0 (required by: ucsc-utils/v489), openssl/3.0.7 (required by: curl/8.4.0) ------------------------------------------------------------------------------- The following have been reloaded with a version change: 1) curl/8.17.0 => curl/8.4.0 Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: curl/8.4.0 (required by: htslib/1.16) ------------------------------------------------------------------------------- The following have been reloaded with a version change: 1) curl/8.4.0 => curl/8.17.0 2026-07-10 15:16:25.387997: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-07-10 15:21:21.712806: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-07-10 15:21:21.802773: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 2026-07-10 15:21:22.036962: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:04:00.0 name: Tesla P100-PCIE-16GB computeCapability: 6.0 coreClock: 1.3285GHz coreCount: 56 deviceMemorySize: 15.89GiB deviceMemoryBandwidth: 681.88GiB/s 2026-07-10 15:21:22.037135: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-07-10 15:21:22.990563: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-07-10 15:21:22.990805: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-07-10 15:21:23.674884: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-07-10 15:21:24.634825: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-07-10 15:21:25.856937: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-07-10 15:21:27.100071: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-07-10 15:21:30.436243: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-07-10 15:21:30.437389: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-07-10 15:21:30.438213: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. 2026-07-10 15:21:30.438532: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-07-10 15:21:30.439198: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:04:00.0 name: Tesla P100-PCIE-16GB computeCapability: 6.0 coreClock: 1.3285GHz coreCount: 56 deviceMemorySize: 15.89GiB deviceMemoryBandwidth: 681.88GiB/s 2026-07-10 15:21:30.439318: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-07-10 15:21:30.439392: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-07-10 15:21:30.439444: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-07-10 15:21:30.439532: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-07-10 15:21:30.439602: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-07-10 15:21:30.439654: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-07-10 15:21:30.439702: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-07-10 15:21:30.439750: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-07-10 15:21:30.440590: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-07-10 15:21:30.440682: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-07-10 15:21:33.221897: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: 2026-07-10 15:21:33.222026: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 2026-07-10 15:21:33.222055: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N 2026-07-10 15:21:33.223051: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 14950 MB memory) -> physical GPU (device: 0, name: Tesla P100-PCIE-16GB, pci bus id: 0000:04:00.0, compute capability: 6.0) 2026-07-10 15:21:43.253593: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) 2026-07-10 15:21:43.254397: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400145000 Hz 2026-07-10 15:21:45.509744: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-07-10 15:21:47.308678: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-07-10 15:21:47.316652: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-07-10 15:22:10.446610: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256 2026-07-10 15:22:10.536487: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: Relying on driver to perform ptx compilation. Modify $PATH to customize ptxas location. This message will be only logged once. /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates', 'jitters', 'index', 'status', 'rev_comp'] which did not match any model input. They will be ignored by the model. [n for n in tensors.keys() if n not in ref_input_names]) /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates'] which did not match any model input. They will be ignored by the model. [n for n in tensors.keys() if n not in ref_input_names]) 2026-07-10 15:25:00.223468: W tensorflow/python/util/util.cc:348] Sets are not currently considered sequences, but this may change in the future, so consider avoiding using them. 2026-07-10 15:25:20.585818: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-07-10 15:26:16.162986: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-07-10 15:26:16.170447: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 2026-07-10 15:26:16.203024: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:04:00.0 name: Tesla P100-PCIE-16GB computeCapability: 6.0 coreClock: 1.3285GHz coreCount: 56 deviceMemorySize: 15.89GiB deviceMemoryBandwidth: 681.88GiB/s 2026-07-10 15:26:16.203161: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-07-10 15:26:16.222674: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-07-10 15:26:16.222861: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-07-10 15:26:16.231347: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-07-10 15:26:16.238166: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-07-10 15:26:16.249502: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-07-10 15:26:16.256839: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-07-10 15:26:16.263265: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-07-10 15:26:16.263865: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-07-10 15:26:16.264266: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. 2026-07-10 15:26:16.264416: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-07-10 15:26:16.264814: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:04:00.0 name: Tesla P100-PCIE-16GB computeCapability: 6.0 coreClock: 1.3285GHz coreCount: 56 deviceMemorySize: 15.89GiB deviceMemoryBandwidth: 681.88GiB/s 2026-07-10 15:26:16.264863: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-07-10 15:26:16.264896: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-07-10 15:26:16.264926: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-07-10 15:26:16.264954: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-07-10 15:26:16.264982: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-07-10 15:26:16.265010: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-07-10 15:26:16.265037: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-07-10 15:26:16.265065: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-07-10 15:26:16.265515: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-07-10 15:26:16.265567: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-07-10 15:26:16.840269: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: 2026-07-10 15:26:16.840395: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 2026-07-10 15:26:16.840418: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N 2026-07-10 15:26:16.841411: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 14950 MB memory) -> physical GPU (device: 0, name: Tesla P100-PCIE-16GB, pci bus id: 0000:04:00.0, compute capability: 6.0) /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors. , UserWarning) batch: 0%| | 0/2 [00:00 physical GPU (device: 0, name: Tesla P100-PCIE-16GB, pci bus id: 0000:04:00.0, compute capability: 6.0) 2026-07-10 15:27:03.509210: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:196] None of the MLIR optimization passes are enabled (registered 0 passes) 2026-07-10 15:27:03.536464: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400145000 Hz 2026-07-10 15:27:04.847596: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-07-10 15:27:05.162130: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-07-10 15:27:05.168068: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-07-10 15:27:06.169692: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256 2026-07-10 15:27:06.252356: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: Relying on driver to perform ptx compilation. Modify $PATH to customize ptxas location. This message will be only logged once. RuntimeError: module compiled against API version 0xe but this version of numpy is 0xd /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors. , UserWarning)