Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.4.0
(required by: htslib/1.16)
-------------------------------------------------------------------------------



Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.17.0
(required by: ucsc-utils/v489), openssl/3.0.7 (required by: curl/8.4.0)
-------------------------------------------------------------------------------




The following have been reloaded with a version change:
  1) curl/8.17.0 => curl/8.4.0

Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.4.0
(required by: htslib/1.16)
-------------------------------------------------------------------------------




The following have been reloaded with a version change:
  1) curl/8.4.0 => curl/8.17.0

2026-07-10 14:55:30.592618: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 14:56:01.566509: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 14:56:01.568023: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1
2026-07-10 14:56:01.587888: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:02:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 14:56:01.588015: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 14:56:01.593100: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 14:56:01.593180: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 14:56:01.595715: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 14:56:01.597271: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 14:56:01.601330: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 14:56:01.603114: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 14:56:01.604631: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 14:56:01.605252: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 14:56:01.605678: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2026-07-10 14:56:01.605765: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 14:56:01.606051: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:02:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 14:56:01.606087: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 14:56:01.606114: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 14:56:01.606153: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 14:56:01.606194: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 14:56:01.606219: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 14:56:01.606241: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 14:56:01.606263: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 14:56:01.606285: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 14:56:01.606663: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 14:56:01.606704: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 14:56:02.169734: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix:
2026-07-10 14:56:02.169858: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267]      0 
2026-07-10 14:56:02.169897: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0:   N 
2026-07-10 14:56:02.170769: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 11209 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN Xp, pci bus id: 0000:02:00.0, compute capability: 6.1)
2026-07-10 14:56:16.903520: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2)
2026-07-10 14:56:16.904105: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400095000 Hz
2026-07-10 14:56:19.693974: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 14:56:20.068847: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 14:56:20.075051: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 14:56:21.343906: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256
2026-07-10 14:56:21.436126: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: 
Relying on driver to perform ptx compilation. 
Modify $PATH to customize ptxas location.
This message will be only logged once.
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates', 'jitters', 'index', 'status', 'rev_comp'] which did not match any model input. They will be ignored by the model.
  [n for n in tensors.keys() if n not in ref_input_names])
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates'] which did not match any model input. They will be ignored by the model.
  [n for n in tensors.keys() if n not in ref_input_names])
2026-07-10 15:58:29.946900: W tensorflow/python/util/util.cc:348] Sets are not currently considered sequences, but this may change in the future, so consider avoiding using them.
2026-07-10 15:58:38.298501: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:58:47.039410: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 15:58:47.040758: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1
2026-07-10 15:58:47.063650: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:02:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 15:58:47.063778: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:58:47.068838: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:58:47.068925: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:58:47.071522: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 15:58:47.072928: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 15:58:47.077070: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 15:58:47.078929: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 15:58:47.080139: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:58:47.080745: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 15:58:47.081169: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2026-07-10 15:58:47.081272: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 15:58:47.081526: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:02:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 15:58:47.081563: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:58:47.081592: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:58:47.081619: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:58:47.081644: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 15:58:47.081670: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 15:58:47.081695: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 15:58:47.081720: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 15:58:47.081746: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:58:47.082210: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 15:58:47.082253: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 15:58:47.625222: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix:
2026-07-10 15:58:47.625326: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267]      0 
2026-07-10 15:58:47.625345: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0:   N 
2026-07-10 15:58:47.626234: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 11209 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN Xp, pci bus id: 0000:02:00.0, compute capability: 6.1)
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors.
  , UserWarning)

batch:   0%|          | 0/216 [00:00<?, ?it/s]2026-07-10 15:58:50.028892: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2)
2026-07-10 15:58:50.029462: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400095000 Hz
2026-07-10 15:58:51.057805: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 15:58:51.860156: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 15:58:51.873060: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 15:58:54.720945: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256
2026-07-10 15:58:54.906057: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: 
Relying on driver to perform ptx compilation. 
Modify $PATH to customize ptxas location.
This message will be only logged once.
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates', 'true_profiles', 'true_logcounts', 'rev_comp'] which did not match any model input. They will be ignored by the model.
  [n for n in tensors.keys() if n not in ref_input_names])

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2026-07-10 16:02:17.238729: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 16:02:29.479964: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 16:02:29.481320: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1
2026-07-10 16:02:29.506214: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:02:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 16:02:29.506354: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 16:02:29.511944: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 16:02:29.512028: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 16:02:29.514698: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 16:02:29.516111: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 16:02:29.520384: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 16:02:29.522496: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 16:02:29.523731: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 16:02:29.524438: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 16:02:29.524879: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  AVX2 FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2026-07-10 16:02:29.524979: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set
2026-07-10 16:02:29.525298: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: 
pciBusID: 0000:02:00.0 name: NVIDIA TITAN Xp computeCapability: 6.1
coreClock: 1.911GHz coreCount: 30 deviceMemorySize: 11.90GiB deviceMemoryBandwidth: 510.07GiB/s
2026-07-10 16:02:29.525352: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 16:02:29.525392: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 16:02:29.525430: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 16:02:29.525467: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10
2026-07-10 16:02:29.525503: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10
2026-07-10 16:02:29.525540: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10
2026-07-10 16:02:29.525576: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11
2026-07-10 16:02:29.525633: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 16:02:29.526129: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0
2026-07-10 16:02:29.526205: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2026-07-10 16:02:30.101324: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix:
2026-07-10 16:02:30.101426: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267]      0 
2026-07-10 16:02:30.101446: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0:   N 
2026-07-10 16:02:30.102375: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 11209 MB memory) -> physical GPU (device: 0, name: NVIDIA TITAN Xp, pci bus id: 0000:02:00.0, compute capability: 6.1)
2026-07-10 16:02:30.169120: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:196] None of the MLIR optimization passes are enabled (registered 0 passes)
2026-07-10 16:02:30.191232: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2400095000 Hz
2026-07-10 16:02:45.401138: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11
2026-07-10 16:02:45.647575: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11
2026-07-10 16:02:45.652609: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8
2026-07-10 16:02:46.562121: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256
2026-07-10 16:02:46.658725: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: 
Relying on driver to perform ptx compilation. 
Modify $PATH to customize ptxas location.
This message will be only logged once.
RuntimeError: module compiled against API version 0xe but this version of numpy is 0xd
/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors.
  , UserWarning)