Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded: curl/8.4.0
(required by: htslib/1.16)
-------------------------------------------------------------------------------




The following have been reloaded with a version change:
  1) curl/8.4.0 => curl/8.17.0     2) openssl/3.0.7 => openssl/3.6.0


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Traceback (most recent call last):
  File "/home/users/shouvikm/miniconda3/envs/bpnet/bin/bpnet-gc-background", line 8, in <module>
    sys.exit(get_gc_background_main())
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/cli/gc/get_gc_background.py", line 69, in get_gc_background_main
    output_prefix=gc_matched_negatives_out)
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/cli/gc/get_gc_matched_negatives.py", line 153, in get_gc_matched_negatives
    cur_gc, used_negatives = adjust_gc(chrom, gc_value, negatives, used_negatives)
  File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/cli/gc/get_gc_matched_negatives.py", line 108, in adjust_gc
    while (cur_gc not in negatives[chrom]) or (len(used_negatives[chrom][cur_gc]) >= len(negatives[chrom][cur_gc])):
KeyError: 'chrM'