Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: curl/8.4.0 (required by: htslib/1.16) ------------------------------------------------------------------------------- The following have been reloaded with a version change: 1) curl/8.4.0 => curl/8.17.0 2) openssl/3.0.7 => openssl/3.6.0 2026-05-11 03:25:13.070521: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:26:56.840492: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-05-11 03:26:56.842277: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 2026-05-11 03:26:56.873995: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:04:00.0 name: Tesla P100-PCIE-16GB computeCapability: 6.0 coreClock: 1.3285GHz coreCount: 56 deviceMemorySize: 15.89GiB deviceMemoryBandwidth: 681.88GiB/s 2026-05-11 03:26:56.874105: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:26:56.906303: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-05-11 03:26:56.906374: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-05-11 03:26:56.921809: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-05-11 03:26:56.936553: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-05-11 03:26:56.955266: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-05-11 03:26:56.971101: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-05-11 03:26:56.986919: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-05-11 03:26:56.987488: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-05-11 03:26:56.987955: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. 2026-05-11 03:26:56.988102: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-05-11 03:26:56.988775: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:04:00.0 name: Tesla P100-PCIE-16GB computeCapability: 6.0 coreClock: 1.3285GHz coreCount: 56 deviceMemorySize: 15.89GiB deviceMemoryBandwidth: 681.88GiB/s 2026-05-11 03:26:56.988863: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:26:56.988919: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-05-11 03:26:56.988968: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-05-11 03:26:56.989013: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-05-11 03:26:56.989058: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-05-11 03:26:56.989103: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-05-11 03:26:56.989147: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-05-11 03:26:56.989213: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-05-11 03:26:56.989925: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-05-11 03:26:56.990009: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:26:57.662820: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: 2026-05-11 03:26:57.662926: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 2026-05-11 03:26:57.662954: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N 2026-05-11 03:26:57.663968: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 14950 MB memory) -> physical GPU (device: 0, name: Tesla P100-PCIE-16GB, pci bus id: 0000:04:00.0, compute capability: 6.0) 2026-05-11 03:26:59.833818: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) 2026-05-11 03:26:59.834574: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2399890000 Hz 2026-05-11 03:27:09.088583: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-05-11 03:27:10.139015: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-05-11 03:27:10.155677: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-05-11 03:27:14.123516: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256 2026-05-11 03:27:14.498103: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: Relying on driver to perform ptx compilation. Modify $PATH to customize ptxas location. This message will be only logged once. /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates', 'jitters', 'index', 'status', 'rev_comp'] which did not match any model input. They will be ignored by the model. [n for n in tensors.keys() if n not in ref_input_names]) /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates'] which did not match any model input. They will be ignored by the model. [n for n in tensors.keys() if n not in ref_input_names]) Process Process-1:249: Traceback (most recent call last): File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/multiprocessing/process.py", line 297, in _bootstrap self.run() File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/multiprocessing/process.py", line 99, in run self._target(*self._args, **self._kwargs) File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/generators/generators.py", line 643, in _proc_target batch = self._generate_batch(batch_df) File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/generators/generators.py", line 1150, in _generate_batch X = sequtils.one_hot_encode(sequences, self._input_flank * 2) File "/home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/bpnet/generators/sequtils.py", line 324, in one_hot_encode int_sequences = list(map(int, sequences_trans)) ValueError: invalid literal for int() with base 10: 'B' [2026-05-11T09:25:01.023] error: *** JOB 24643334 ON sh02-12n06 CANCELLED AT 2026-05-11T09:25:01 DUE TO TIME LIMIT ***