Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: curl/8.4.0 (required by: htslib/1.16) ------------------------------------------------------------------------------- The following have been reloaded with a version change: 1) curl/8.4.0 => curl/8.17.0 2) openssl/3.0.7 => openssl/3.6.0 2026-05-11 03:35:45.567833: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:37:44.481063: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-05-11 03:37:44.489596: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 2026-05-11 03:37:44.532860: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:4a:00.0 name: NVIDIA L40S computeCapability: 8.9 coreClock: 2.52GHz coreCount: 142 deviceMemorySize: 44.52GiB deviceMemoryBandwidth: 804.75GiB/s 2026-05-11 03:37:44.532942: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:37:44.562765: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-05-11 03:37:44.562867: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-05-11 03:37:44.577908: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-05-11 03:37:44.592150: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-05-11 03:37:44.608265: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-05-11 03:37:44.623004: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-05-11 03:37:44.637208: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-05-11 03:37:44.637672: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-05-11 03:37:44.638040: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 AVX512F FMA To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. 2026-05-11 03:37:44.638209: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-05-11 03:37:44.638431: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:4a:00.0 name: NVIDIA L40S computeCapability: 8.9 coreClock: 2.52GHz coreCount: 142 deviceMemorySize: 44.52GiB deviceMemoryBandwidth: 804.75GiB/s 2026-05-11 03:37:44.638451: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:37:44.638465: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-05-11 03:37:44.638475: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-05-11 03:37:44.638484: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-05-11 03:37:44.638494: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-05-11 03:37:44.638503: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-05-11 03:37:44.638512: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-05-11 03:37:44.638540: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-05-11 03:37:44.638813: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-05-11 03:37:44.638833: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:37:45.059123: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: 2026-05-11 03:37:45.059215: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 2026-05-11 03:37:45.059226: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N 2026-05-11 03:37:45.059890: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 42313 MB memory) -> physical GPU (device: 0, name: NVIDIA L40S, pci bus id: 0000:4a:00.0, compute capability: 8.9) 2026-05-11 03:37:46.737391: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of the MLIR optimization passes are enabled (registered 2) 2026-05-11 03:37:46.737904: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2500000000 Hz 2026-05-11 03:37:48.093295: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-05-11 03:37:48.584099: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-05-11 03:37:48.588624: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-05-11 03:37:50.284002: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256 2026-05-11 03:37:50.372363: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: Relying on driver to perform ptx compilation. Modify $PATH to customize ptxas location. This message will be only logged once. 2026-05-11 03:39:11.368288: I tensorflow/stream_executor/cuda/cuda_blas.cc:1838] TensorFloat-32 will be used for the matrix multiplication. This will only be logged once. /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates', 'jitters', 'index', 'status', 'rev_comp'] which did not match any model input. They will be ignored by the model. [n for n in tensors.keys() if n not in ref_input_names]) /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/engine/functional.py:595: UserWarning: Input dict contained keys ['coordinates'] which did not match any model input. They will be ignored by the model. [n for n in tensors.keys() if n not in ref_input_names]) 2026-05-11 03:44:52.192875: W tensorflow/python/util/util.cc:348] Sets are not currently considered sequences, but this may change in the future, so consider avoiding using them. 2026-05-11 03:46:39.455074: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:52:12.796032: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-05-11 03:52:12.803513: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcuda.so.1 2026-05-11 03:52:12.854251: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:4a:00.0 name: NVIDIA L40S computeCapability: 8.9 coreClock: 2.52GHz coreCount: 142 deviceMemorySize: 44.52GiB deviceMemoryBandwidth: 804.75GiB/s 2026-05-11 03:52:12.854300: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:52:12.892028: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-05-11 03:52:12.892119: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-05-11 03:52:12.911723: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-05-11 03:52:12.930422: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-05-11 03:52:12.951593: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-05-11 03:52:12.970866: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-05-11 03:52:12.989969: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-05-11 03:52:12.990374: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-05-11 03:52:12.990604: I tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 AVX512F FMA To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags. 2026-05-11 03:52:12.990722: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not creating XLA devices, tf_xla_enable_xla_devices not set 2026-05-11 03:52:12.990921: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1720] Found device 0 with properties: pciBusID: 0000:4a:00.0 name: NVIDIA L40S computeCapability: 8.9 coreClock: 2.52GHz coreCount: 142 deviceMemorySize: 44.52GiB deviceMemoryBandwidth: 804.75GiB/s 2026-05-11 03:52:12.990939: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:52:12.990952: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-05-11 03:52:12.990963: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-05-11 03:52:12.990972: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcufft.so.10 2026-05-11 03:52:12.990982: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcurand.so.10 2026-05-11 03:52:12.990992: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusolver.so.10 2026-05-11 03:52:12.991002: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcusparse.so.11 2026-05-11 03:52:12.991012: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-05-11 03:52:12.991301: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1862] Adding visible gpu devices: 0 2026-05-11 03:52:12.991322: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 2026-05-11 03:52:13.403801: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1261] Device interconnect StreamExecutor with strength 1 edge matrix: 2026-05-11 03:52:13.403901: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1267] 0 2026-05-11 03:52:13.403910: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1280] 0: N 2026-05-11 03:52:13.404568: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1406] Created TensorFlow device (/job:localhost/replica:0/task:0/device:GPU:0 with 42313 MB memory) -> physical GPU (device: 0, name: NVIDIA L40S, pci bus id: 0000:4a:00.0, compute capability: 8.9) /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors. , UserWarning) batch: 0%| | 0/18 [00:00 physical GPU (device: 0, name: NVIDIA L40S, pci bus id: 0000:4a:00.0, compute capability: 8.9) 2026-05-11 04:08:42.854529: I tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:196] None of the MLIR optimization passes are enabled (registered 0 passes) 2026-05-11 04:08:42.867960: I tensorflow/core/platform/profile_utils/cpu_utils.cc:112] CPU Frequency: 2500000000 Hz 2026-05-11 04:08:57.839705: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublas.so.11 2026-05-11 04:08:58.318384: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcublasLt.so.11 2026-05-11 04:08:58.321761: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudnn.so.8 2026-05-11 04:09:11.272773: W tensorflow/stream_executor/gpu/asm_compiler.cc:63] Running ptxas --version returned 256 2026-05-11 04:09:11.362408: W tensorflow/stream_executor/gpu/redzone_allocator.cc:314] Internal: ptxas exited with non-zero error code 256, output: Relying on driver to perform ptx compilation. Modify $PATH to customize ptxas location. This message will be only logged once. 2026-05-11 04:10:50.375355: I tensorflow/stream_executor/cuda/cuda_blas.cc:1838] TensorFloat-32 will be used for the matrix multiplication. This will only be logged once. RuntimeError: module compiled against API version 0xe but this version of numpy is 0xd /home/users/shouvikm/miniconda3/envs/bpnet/lib/python3.7/site-packages/tensorflow/python/keras/layers/core.py:1059: UserWarning: bpnet.model.arch is not loaded, but a Lambda layer uses it. It may cause errors. , UserWarning)