INFO:2026-05-28 11:57:03,353:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-05-28 11:57:03,377:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 124 samples) - 2048 INFO:2026-05-28 11:57:03,381:[predict.py:460 - predict() ] Writing predictions to predictions/U937_AML1/fold_3/model_split000_predictions.h5 DEBUG:2026-05-28 11:57:03,396:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (1024, 3) sum(num_batches) 16 DEBUG:2026-05-28 11:57:03,435:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (1024, 3) sum(num_batches) 32 DEBUG:2026-05-28 11:57:03,469:[generators.py:757 - _epoch_run() ] test num_batches list [16, 16] DEBUG:2026-05-28 11:57:03,470:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [16] DEBUG:2026-05-28 11:57:03,470:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [16] DEBUG:2026-05-28 11:57:08,548:[generators.py:652 - _proc_target() ] test process 1 put 16 batches into mpq DEBUG:2026-05-28 11:57:08,683:[generators.py:676 - _stealer() ] test stealer thread 1 got 16 batches from mpq DEBUG:2026-05-28 11:57:09,141:[generators.py:652 - _proc_target() ] test process 0 put 16 batches into mpq DEBUG:2026-05-28 11:57:09,224:[generators.py:676 - _stealer() ] test stealer thread 0 got 16 batches from mpq DEBUG:2026-05-28 11:57:56,728:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-05-28 11:57:56,728:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-05-28 11:57:56,728:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-05-28 11:57:56,728:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-05-28 11:57:56,729:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-05-28 11:57:56,729:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-05-28 11:57:56,729:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-05-28 11:57:56,729:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-05-28 11:57:56,729:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-05-28 11:57:58,110:[predict.py:747 - predict() ] Elapsed Time: 54.72628140449524 secs INFO:2026-05-28 11:57:58,110:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-05-28 11:57:58,111:[predict.py:753 - predict() ] predictions shape - (1924, 1000, 2) INFO:2026-05-28 11:57:58,118:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-05-28 11:58:05,029:[predict.py:801 - predict() ] min max median INFO:2026-05-28 11:58:05,030:[predict.py:806 - predict() ] mnll 0.000 0.383 0.158 INFO:2026-05-28 11:58:05,030:[predict.py:811 - predict() ] cross_entropy 0.000 0.383 0.159 INFO:2026-05-28 11:58:05,030:[predict.py:816 - predict() ] jsd 0.299 0.757 0.561 INFO:2026-05-28 11:58:05,031:[predict.py:821 - predict() ] spearman -0.036 0.922 0.725 INFO:2026-05-28 11:58:05,031:[predict.py:826 - predict() ] pearson -0.003 0.894 0.614 INFO:2026-05-28 11:58:05,031:[predict.py:831 - predict() ] mse 0.017 0.624 0.061 INFO:2026-05-28 11:58:05,031:[predict.py:833 - predict() ] ============================================== INFO:2026-05-28 11:58:05,043:[predict.py:848 - predict() ] counts pearson: [0.53844026 0.5396779 ] INFO:2026-05-28 11:58:05,043:[predict.py:849 - predict() ] counts spearman: [0.53526237 0.53572477]