INFO:2026-05-26 11:01:43,206:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-05-26 11:01:43,231:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 95 samples) - 3456 INFO:2026-05-26 11:01:43,235:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi_ETO/fold_0/model_split000_predictions.h5 DEBUG:2026-05-26 11:01:43,246:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (1728, 3) sum(num_batches) 27 DEBUG:2026-05-26 11:01:43,273:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (1728, 3) sum(num_batches) 54 DEBUG:2026-05-26 11:01:43,296:[generators.py:757 - _epoch_run() ] test num_batches list [27, 27] DEBUG:2026-05-26 11:01:43,296:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [27] DEBUG:2026-05-26 11:01:43,296:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [27] DEBUG:2026-05-26 11:01:47,952:[generators.py:652 - _proc_target() ] test process 0 put 27 batches into mpq DEBUG:2026-05-26 11:01:48,019:[generators.py:676 - _stealer() ] test stealer thread 0 got 27 batches from mpq DEBUG:2026-05-26 11:01:48,040:[generators.py:652 - _proc_target() ] test process 1 put 27 batches into mpq DEBUG:2026-05-26 11:01:48,058:[generators.py:676 - _stealer() ] test stealer thread 1 got 27 batches from mpq DEBUG:2026-05-26 11:02:18,323:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-05-26 11:02:18,324:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-05-26 11:02:18,324:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-05-26 11:02:18,324:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-05-26 11:02:18,324:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-05-26 11:02:18,324:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-05-26 11:02:18,324:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-05-26 11:02:18,324:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-05-26 11:02:18,324:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-05-26 11:02:19,884:[predict.py:747 - predict() ] Elapsed Time: 36.64801788330078 secs INFO:2026-05-26 11:02:19,884:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-05-26 11:02:19,885:[predict.py:753 - predict() ] predictions shape - (3361, 1000, 2) INFO:2026-05-26 11:02:19,888:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-05-26 11:02:28,235:[predict.py:801 - predict() ] min max median INFO:2026-05-26 11:02:28,236:[predict.py:806 - predict() ] mnll 0.000 0.642 0.226 INFO:2026-05-26 11:02:28,236:[predict.py:811 - predict() ] cross_entropy 0.000 0.642 0.226 INFO:2026-05-26 11:02:28,236:[predict.py:816 - predict() ] jsd 0.231 0.709 0.535 INFO:2026-05-26 11:02:28,236:[predict.py:821 - predict() ] spearman -0.058 0.904 0.663 INFO:2026-05-26 11:02:28,236:[predict.py:826 - predict() ] pearson -0.097 0.917 0.638 INFO:2026-05-26 11:02:28,237:[predict.py:831 - predict() ] mse 0.007 2.285 0.053 INFO:2026-05-26 11:02:28,237:[predict.py:833 - predict() ] ============================================== INFO:2026-05-26 11:02:28,246:[predict.py:848 - predict() ] counts pearson: [0.5348731 0.53474245] INFO:2026-05-26 11:02:28,246:[predict.py:849 - predict() ] counts spearman: [0.51950529 0.51687834] INFO:2026-05-28 12:12:16,564:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-05-28 12:12:16,603:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 95 samples) - 3456 INFO:2026-05-28 12:12:16,640:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi_ETO/fold_0/model_split000_predictions.h5 DEBUG:2026-05-28 12:12:16,655:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (1728, 3) sum(num_batches) 27 DEBUG:2026-05-28 12:12:16,690:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (1728, 3) sum(num_batches) 54 DEBUG:2026-05-28 12:12:16,721:[generators.py:757 - _epoch_run() ] test num_batches list [27, 27] DEBUG:2026-05-28 12:12:16,722:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [27] DEBUG:2026-05-28 12:12:16,722:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [27] DEBUG:2026-05-28 12:12:24,747:[generators.py:652 - _proc_target() ] test process 1 put 27 batches into mpq DEBUG:2026-05-28 12:12:24,786:[generators.py:676 - _stealer() ] test stealer thread 1 got 27 batches from mpq DEBUG:2026-05-28 12:12:26,403:[generators.py:652 - _proc_target() ] test process 0 put 27 batches into mpq DEBUG:2026-05-28 12:12:26,440:[generators.py:676 - _stealer() ] test stealer thread 0 got 27 batches from mpq DEBUG:2026-05-28 12:13:15,570:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-05-28 12:13:15,571:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-05-28 12:13:15,571:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-05-28 12:13:15,571:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-05-28 12:13:15,571:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-05-28 12:13:15,571:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-05-28 12:13:15,571:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-05-28 12:13:15,571:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-05-28 12:13:15,571:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-05-28 12:13:18,885:[predict.py:747 - predict() ] Elapsed Time: 62.24283242225647 secs INFO:2026-05-28 12:13:18,886:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-05-28 12:13:18,886:[predict.py:753 - predict() ] predictions shape - (3361, 1000, 2) INFO:2026-05-28 12:13:18,896:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-05-28 12:13:31,869:[predict.py:801 - predict() ] min max median INFO:2026-05-28 12:13:31,870:[predict.py:806 - predict() ] mnll 0.000 0.657 0.227 INFO:2026-05-28 12:13:31,870:[predict.py:811 - predict() ] cross_entropy 0.000 0.657 0.227 INFO:2026-05-28 12:13:31,870:[predict.py:816 - predict() ] jsd 0.216 0.701 0.535 INFO:2026-05-28 12:13:31,871:[predict.py:821 - predict() ] spearman -0.086 0.907 0.664 INFO:2026-05-28 12:13:31,871:[predict.py:826 - predict() ] pearson -0.098 0.917 0.639 INFO:2026-05-28 12:13:31,871:[predict.py:831 - predict() ] mse 0.007 2.420 0.054 INFO:2026-05-28 12:13:31,871:[predict.py:833 - predict() ] ============================================== INFO:2026-05-28 12:13:31,885:[predict.py:848 - predict() ] counts pearson: [0.54357382 0.54242448] INFO:2026-05-28 12:13:31,885:[predict.py:849 - predict() ] counts spearman: [0.52600099 0.52480066]