INFO:2026-07-10 00:23:05,094:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 00:23:05,108:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 37 samples) - 1152 INFO:2026-07-10 00:23:05,112:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi-1_parental_anti-ETO/fold_1/model_split000_predictions.h5 DEBUG:2026-07-10 00:23:05,126:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (576, 3) sum(num_batches) 9 DEBUG:2026-07-10 00:23:05,160:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (576, 3) sum(num_batches) 18 DEBUG:2026-07-10 00:23:05,189:[generators.py:757 - _epoch_run() ] test num_batches list [9, 9] DEBUG:2026-07-10 00:23:05,189:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [9] DEBUG:2026-07-10 00:23:05,190:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [9] DEBUG:2026-07-10 00:23:07,120:[generators.py:676 - _stealer() ] test stealer thread 0 got 9 batches from mpq DEBUG:2026-07-10 00:23:07,109:[generators.py:652 - _proc_target() ] test process 0 put 9 batches into mpq DEBUG:2026-07-10 00:23:08,276:[generators.py:652 - _proc_target() ] test process 1 put 9 batches into mpq DEBUG:2026-07-10 00:23:08,348:[generators.py:676 - _stealer() ] test stealer thread 1 got 9 batches from mpq DEBUG:2026-07-10 00:23:37,903:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 00:23:37,904:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 00:23:37,904:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 00:23:37,904:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 00:23:37,904:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 00:23:37,904:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 00:23:37,904:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 00:23:37,904:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 00:23:37,904:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 00:23:38,717:[predict.py:747 - predict() ] Elapsed Time: 33.60142946243286 secs INFO:2026-07-10 00:23:38,717:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 00:23:38,717:[predict.py:753 - predict() ] predictions shape - (1115, 1000, 2) INFO:2026-07-10 00:23:38,724:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 00:23:41,524:[predict.py:801 - predict() ] min max median INFO:2026-07-10 00:23:41,524:[predict.py:806 - predict() ] mnll 0.000 0.815 0.471 INFO:2026-07-10 00:23:41,525:[predict.py:811 - predict() ] cross_entropy 0.000 0.815 0.472 INFO:2026-07-10 00:23:41,525:[predict.py:816 - predict() ] jsd 0.036 0.401 0.235 INFO:2026-07-10 00:23:41,525:[predict.py:821 - predict() ] spearman -0.109 0.431 0.182 INFO:2026-07-10 00:23:41,525:[predict.py:826 - predict() ] pearson -0.177 0.582 0.153 INFO:2026-07-10 00:23:41,525:[predict.py:831 - predict() ] mse 0.038 12.656 0.213 INFO:2026-07-10 00:23:41,525:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 00:23:41,551:[predict.py:848 - predict() ] counts pearson: [0.43132588 0.43698545] INFO:2026-07-10 00:23:41,551:[predict.py:849 - predict() ] counts spearman: [0.39806053 0.39960261] INFO:2026-07-10 15:21:46,998:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 15:21:47,026:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 37 samples) - 1152 INFO:2026-07-10 15:21:47,320:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi-1_parental_anti-ETO/fold_1/model_split000_predictions.h5 DEBUG:2026-07-10 15:21:47,421:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (576, 3) sum(num_batches) 9 DEBUG:2026-07-10 15:21:47,471:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (576, 3) sum(num_batches) 18 DEBUG:2026-07-10 15:21:47,517:[generators.py:757 - _epoch_run() ] test num_batches list [9, 9] DEBUG:2026-07-10 15:21:47,518:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [9] DEBUG:2026-07-10 15:21:47,527:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [9] DEBUG:2026-07-10 15:21:50,817:[generators.py:652 - _proc_target() ] test process 0 put 9 batches into mpq DEBUG:2026-07-10 15:21:50,830:[generators.py:676 - _stealer() ] test stealer thread 0 got 9 batches from mpq DEBUG:2026-07-10 15:21:52,090:[generators.py:652 - _proc_target() ] test process 1 put 9 batches into mpq DEBUG:2026-07-10 15:21:52,128:[generators.py:676 - _stealer() ] test stealer thread 1 got 9 batches from mpq DEBUG:2026-07-10 15:22:51,682:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 15:22:51,682:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 15:22:51,682:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 15:22:51,682:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 15:22:51,682:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 15:22:51,682:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 15:22:51,682:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 15:22:51,682:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 15:22:51,682:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 15:22:52,661:[predict.py:747 - predict() ] Elapsed Time: 65.33772015571594 secs INFO:2026-07-10 15:22:52,661:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 15:22:52,661:[predict.py:753 - predict() ] predictions shape - (1115, 1000, 2) INFO:2026-07-10 15:22:52,665:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 15:22:58,030:[predict.py:801 - predict() ] min max median INFO:2026-07-10 15:22:58,030:[predict.py:806 - predict() ] mnll 0.000 0.799 0.444 INFO:2026-07-10 15:22:58,030:[predict.py:811 - predict() ] cross_entropy 0.000 0.799 0.444 INFO:2026-07-10 15:22:58,030:[predict.py:816 - predict() ] jsd 0.012 0.381 0.233 INFO:2026-07-10 15:22:58,031:[predict.py:821 - predict() ] spearman -0.070 0.428 0.152 INFO:2026-07-10 15:22:58,031:[predict.py:826 - predict() ] pearson -0.159 0.606 0.101 INFO:2026-07-10 15:22:58,031:[predict.py:831 - predict() ] mse 0.038 12.690 0.226 INFO:2026-07-10 15:22:58,031:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 15:22:58,079:[predict.py:848 - predict() ] counts pearson: [0.46666131 0.47170106] INFO:2026-07-10 15:22:58,079:[predict.py:849 - predict() ] counts spearman: [0.41139363 0.41739471]