INFO:2026-07-10 00:06:05,418:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 00:06:05,430:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 34 samples) - 128 INFO:2026-07-10 00:06:05,434:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi-1_RUNX1/fold_4/model_split000_predictions.h5 DEBUG:2026-07-10 00:06:05,478:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (64, 3) sum(num_batches) 1 DEBUG:2026-07-10 00:06:05,545:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (64, 3) sum(num_batches) 2 DEBUG:2026-07-10 00:06:05,602:[generators.py:757 - _epoch_run() ] test num_batches list [1, 1] DEBUG:2026-07-10 00:06:05,602:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [1] DEBUG:2026-07-10 00:06:05,603:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [1] DEBUG:2026-07-10 00:06:05,769:[generators.py:652 - _proc_target() ] test process 0 put 1 batches into mpq DEBUG:2026-07-10 00:06:05,795:[generators.py:676 - _stealer() ] test stealer thread 0 got 1 batches from mpq DEBUG:2026-07-10 00:06:05,830:[generators.py:652 - _proc_target() ] test process 1 put 1 batches into mpq DEBUG:2026-07-10 00:06:05,883:[generators.py:676 - _stealer() ] test stealer thread 1 got 1 batches from mpq DEBUG:2026-07-10 00:10:12,511:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 00:10:12,511:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 00:10:12,511:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 00:10:12,511:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 00:10:12,511:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 00:10:12,511:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 00:10:12,511:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 00:10:12,511:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 00:10:12,511:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 00:10:12,550:[predict.py:747 - predict() ] Elapsed Time: 247.1149456501007 secs INFO:2026-07-10 00:10:12,550:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 00:10:12,550:[predict.py:753 - predict() ] predictions shape - (94, 1000, 2) INFO:2026-07-10 00:10:12,554:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 00:10:12,768:[predict.py:801 - predict() ] min max median INFO:2026-07-10 00:10:12,768:[predict.py:806 - predict() ] mnll 0.000 0.898 0.264 INFO:2026-07-10 00:10:12,768:[predict.py:811 - predict() ] cross_entropy 0.000 0.898 0.264 INFO:2026-07-10 00:10:12,768:[predict.py:816 - predict() ] jsd 0.112 0.675 0.403 INFO:2026-07-10 00:10:12,769:[predict.py:821 - predict() ] spearman -0.278 0.891 0.436 INFO:2026-07-10 00:10:12,769:[predict.py:826 - predict() ] pearson -0.433 0.877 0.447 INFO:2026-07-10 00:10:12,769:[predict.py:831 - predict() ] mse 0.014 14.046 0.073 INFO:2026-07-10 00:10:12,769:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 00:10:12,775:[predict.py:848 - predict() ] counts pearson: [0.45925149 0.44333886] INFO:2026-07-10 00:10:12,775:[predict.py:849 - predict() ] counts spearman: [0.41374004 0.35816183] INFO:2026-07-10 15:04:41,278:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 15:04:41,328:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 34 samples) - 128 INFO:2026-07-10 15:04:41,634:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi-1_RUNX1/fold_4/model_split000_predictions.h5 DEBUG:2026-07-10 15:04:41,696:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (64, 3) sum(num_batches) 1 DEBUG:2026-07-10 15:04:41,739:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (64, 3) sum(num_batches) 2 DEBUG:2026-07-10 15:04:41,768:[generators.py:757 - _epoch_run() ] test num_batches list [1, 1] DEBUG:2026-07-10 15:04:41,769:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [1] DEBUG:2026-07-10 15:04:41,778:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [1] DEBUG:2026-07-10 15:04:42,096:[generators.py:652 - _proc_target() ] test process 0 put 1 batches into mpq DEBUG:2026-07-10 15:04:42,122:[generators.py:652 - _proc_target() ] test process 1 put 1 batches into mpq DEBUG:2026-07-10 15:04:42,137:[generators.py:676 - _stealer() ] test stealer thread 0 got 1 batches from mpq DEBUG:2026-07-10 15:04:42,187:[generators.py:676 - _stealer() ] test stealer thread 1 got 1 batches from mpq DEBUG:2026-07-10 15:04:55,887:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 15:04:55,888:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 15:04:55,888:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 15:04:55,888:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 15:04:55,888:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 15:04:55,888:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 15:04:55,888:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 15:04:55,888:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 15:04:55,889:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 15:04:55,957:[predict.py:747 - predict() ] Elapsed Time: 14.31796145439148 secs INFO:2026-07-10 15:04:55,958:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 15:04:55,958:[predict.py:753 - predict() ] predictions shape - (94, 1000, 2) INFO:2026-07-10 15:04:55,964:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 15:04:56,528:[predict.py:801 - predict() ] min max median INFO:2026-07-10 15:04:56,529:[predict.py:806 - predict() ] mnll 0.000 0.886 0.234 INFO:2026-07-10 15:04:56,529:[predict.py:811 - predict() ] cross_entropy 0.000 0.886 0.234 INFO:2026-07-10 15:04:56,530:[predict.py:816 - predict() ] jsd 0.050 0.633 0.392 INFO:2026-07-10 15:04:56,530:[predict.py:821 - predict() ] spearman -0.330 0.825 0.381 INFO:2026-07-10 15:04:56,530:[predict.py:826 - predict() ] pearson -0.492 0.872 0.489 INFO:2026-07-10 15:04:56,531:[predict.py:831 - predict() ] mse 0.013 15.034 0.074 INFO:2026-07-10 15:04:56,531:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 15:04:57,363:[predict.py:848 - predict() ] counts pearson: [0.49926737 0.46726544] INFO:2026-07-10 15:04:57,364:[predict.py:849 - predict() ] counts spearman: [0.418242 0.33699487]