INFO:2026-07-09 22:56:17,016:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-09 22:56:17,036:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 34 samples) - 256 INFO:2026-07-09 22:56:17,119:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi-1_AE/fold_3/model_split000_predictions.h5 DEBUG:2026-07-09 22:56:17,141:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (128, 3) sum(num_batches) 2 DEBUG:2026-07-09 22:56:17,170:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (128, 3) sum(num_batches) 4 DEBUG:2026-07-09 22:56:17,192:[generators.py:757 - _epoch_run() ] test num_batches list [2, 2] DEBUG:2026-07-09 22:56:17,193:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [2] DEBUG:2026-07-09 22:56:17,193:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [2] DEBUG:2026-07-09 22:56:17,954:[generators.py:652 - _proc_target() ] test process 1 put 2 batches into mpq DEBUG:2026-07-09 22:56:17,982:[generators.py:676 - _stealer() ] test stealer thread 1 got 2 batches from mpq DEBUG:2026-07-09 22:56:18,097:[generators.py:652 - _proc_target() ] test process 0 put 2 batches into mpq DEBUG:2026-07-09 22:56:18,124:[generators.py:676 - _stealer() ] test stealer thread 0 got 2 batches from mpq DEBUG:2026-07-09 22:56:28,174:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-09 22:56:28,174:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-09 22:56:28,175:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-09 22:56:28,175:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-09 22:56:28,175:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-09 22:56:28,175:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-09 22:56:28,175:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-09 22:56:28,175:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-09 22:56:28,175:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-09 22:56:28,281:[predict.py:747 - predict() ] Elapsed Time: 11.155000925064087 secs INFO:2026-07-09 22:56:28,282:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-09 22:56:28,282:[predict.py:753 - predict() ] predictions shape - (222, 1000, 2) INFO:2026-07-09 22:56:28,291:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-09 22:56:29,045:[predict.py:801 - predict() ] min max median INFO:2026-07-09 22:56:29,046:[predict.py:806 - predict() ] mnll 0.000 0.199 0.049 INFO:2026-07-09 22:56:29,046:[predict.py:811 - predict() ] cross_entropy 0.000 0.199 0.049 INFO:2026-07-09 22:56:29,047:[predict.py:816 - predict() ] jsd 0.086 0.492 0.287 INFO:2026-07-09 22:56:29,047:[predict.py:821 - predict() ] spearman -0.539 0.744 0.298 INFO:2026-07-09 22:56:29,047:[predict.py:826 - predict() ] pearson -0.714 0.826 0.387 INFO:2026-07-09 22:56:29,048:[predict.py:831 - predict() ] mse 0.013 1.382 0.034 INFO:2026-07-09 22:56:29,048:[predict.py:833 - predict() ] ============================================== INFO:2026-07-09 22:56:29,086:[predict.py:848 - predict() ] counts pearson: [0.50615088 0.4891056 ] INFO:2026-07-09 22:56:29,086:[predict.py:849 - predict() ] counts spearman: [0.43634959 0.41357456] INFO:2026-07-10 14:48:21,524:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 14:48:21,556:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 34 samples) - 256 INFO:2026-07-10 14:48:21,587:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi-1_AE/fold_3/model_split000_predictions.h5 DEBUG:2026-07-10 14:48:21,602:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (128, 3) sum(num_batches) 2 DEBUG:2026-07-10 14:48:21,623:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (128, 3) sum(num_batches) 4 DEBUG:2026-07-10 14:48:21,658:[generators.py:757 - _epoch_run() ] test num_batches list [2, 2] DEBUG:2026-07-10 14:48:21,658:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [2] DEBUG:2026-07-10 14:48:21,659:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [2] DEBUG:2026-07-10 14:48:23,544:[generators.py:652 - _proc_target() ] test process 0 put 2 batches into mpq DEBUG:2026-07-10 14:48:23,574:[generators.py:676 - _stealer() ] test stealer thread 0 got 2 batches from mpq DEBUG:2026-07-10 14:48:23,607:[generators.py:652 - _proc_target() ] test process 1 put 2 batches into mpq DEBUG:2026-07-10 14:48:23,631:[generators.py:676 - _stealer() ] test stealer thread 1 got 2 batches from mpq DEBUG:2026-07-10 14:48:32,510:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 14:48:32,510:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 14:48:32,510:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 14:48:32,510:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 14:48:32,510:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 14:48:32,510:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 14:48:32,510:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 14:48:32,510:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 14:48:32,511:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 14:48:32,624:[predict.py:747 - predict() ] Elapsed Time: 11.032016277313232 secs INFO:2026-07-10 14:48:32,624:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 14:48:32,624:[predict.py:753 - predict() ] predictions shape - (222, 1000, 2) INFO:2026-07-10 14:48:32,629:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 14:48:33,625:[predict.py:801 - predict() ] min max median INFO:2026-07-10 14:48:33,626:[predict.py:806 - predict() ] mnll 0.000 0.433 0.094 INFO:2026-07-10 14:48:33,626:[predict.py:811 - predict() ] cross_entropy 0.000 0.433 0.094 INFO:2026-07-10 14:48:33,627:[predict.py:816 - predict() ] jsd 0.076 0.615 0.340 INFO:2026-07-10 14:48:33,627:[predict.py:821 - predict() ] spearman -0.533 0.883 0.398 INFO:2026-07-10 14:48:33,627:[predict.py:826 - predict() ] pearson -0.550 0.898 0.473 INFO:2026-07-10 14:48:33,628:[predict.py:831 - predict() ] mse 0.013 1.359 0.034 INFO:2026-07-10 14:48:33,628:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 14:48:33,870:[predict.py:848 - predict() ] counts pearson: [0.51518159 0.49208798] INFO:2026-07-10 14:48:33,871:[predict.py:849 - predict() ] counts spearman: [0.44851186 0.39941257]