INFO:2026-07-09 22:49:12,408:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-09 22:49:12,426:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 34 samples) - 256 INFO:2026-07-09 22:49:12,446:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi-1_AE/fold_0/model_split000_predictions.h5 DEBUG:2026-07-09 22:49:12,461:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (128, 3) sum(num_batches) 2 DEBUG:2026-07-09 22:49:12,482:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (128, 3) sum(num_batches) 4 DEBUG:2026-07-09 22:49:12,500:[generators.py:757 - _epoch_run() ] test num_batches list [2, 2] DEBUG:2026-07-09 22:49:12,500:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [2] DEBUG:2026-07-09 22:49:12,501:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [2] DEBUG:2026-07-09 22:49:13,900:[generators.py:652 - _proc_target() ] test process 1 put 2 batches into mpq DEBUG:2026-07-09 22:49:13,917:[generators.py:676 - _stealer() ] test stealer thread 1 got 2 batches from mpq DEBUG:2026-07-09 22:49:14,238:[generators.py:652 - _proc_target() ] test process 0 put 2 batches into mpq DEBUG:2026-07-09 22:49:14,254:[generators.py:676 - _stealer() ] test stealer thread 0 got 2 batches from mpq DEBUG:2026-07-09 22:49:24,073:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-09 22:49:24,073:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-09 22:49:24,073:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-09 22:49:24,074:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-09 22:49:24,074:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-09 22:49:24,074:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-09 22:49:24,074:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-09 22:49:24,074:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-09 22:49:24,074:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-09 22:49:24,178:[predict.py:747 - predict() ] Elapsed Time: 11.727739810943604 secs INFO:2026-07-09 22:49:24,178:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-09 22:49:24,178:[predict.py:753 - predict() ] predictions shape - (222, 1000, 2) INFO:2026-07-09 22:49:24,182:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-09 22:49:24,891:[predict.py:801 - predict() ] min max median INFO:2026-07-09 22:49:24,891:[predict.py:806 - predict() ] mnll 0.000 0.048 0.006 INFO:2026-07-09 22:49:24,892:[predict.py:811 - predict() ] cross_entropy 0.000 0.048 0.006 INFO:2026-07-09 22:49:24,892:[predict.py:816 - predict() ] jsd 0.098 0.429 0.247 INFO:2026-07-09 22:49:24,892:[predict.py:821 - predict() ] spearman -0.168 0.330 0.079 INFO:2026-07-09 22:49:24,892:[predict.py:826 - predict() ] pearson -0.404 0.436 0.095 INFO:2026-07-09 22:49:24,892:[predict.py:831 - predict() ] mse 0.013 1.365 0.034 INFO:2026-07-09 22:49:24,892:[predict.py:833 - predict() ] ============================================== INFO:2026-07-09 22:49:24,905:[predict.py:848 - predict() ] counts pearson: [0.58490261 0.58164177] INFO:2026-07-09 22:49:24,905:[predict.py:849 - predict() ] counts spearman: [0.46272541 0.46133219] INFO:2026-07-10 15:30:31,742:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 15:30:31,774:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 34 samples) - 256 INFO:2026-07-10 15:30:31,791:[predict.py:460 - predict() ] Writing predictions to predictions/Kasumi-1_AE/fold_0/model_split000_predictions.h5 DEBUG:2026-07-10 15:30:31,818:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (128, 3) sum(num_batches) 2 DEBUG:2026-07-10 15:30:31,863:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (128, 3) sum(num_batches) 4 DEBUG:2026-07-10 15:30:31,933:[generators.py:757 - _epoch_run() ] test num_batches list [2, 2] DEBUG:2026-07-10 15:30:31,933:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [2] DEBUG:2026-07-10 15:30:31,957:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [2] DEBUG:2026-07-10 15:30:33,134:[generators.py:652 - _proc_target() ] test process 0 put 2 batches into mpq DEBUG:2026-07-10 15:30:33,167:[generators.py:676 - _stealer() ] test stealer thread 0 got 2 batches from mpq DEBUG:2026-07-10 15:30:33,298:[generators.py:652 - _proc_target() ] test process 1 put 2 batches into mpq DEBUG:2026-07-10 15:30:33,322:[generators.py:676 - _stealer() ] test stealer thread 1 got 2 batches from mpq DEBUG:2026-07-10 15:34:45,947:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 15:34:45,947:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 15:34:45,947:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 15:34:45,947:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 15:34:45,948:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 15:34:45,948:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 15:34:45,948:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 15:34:45,948:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 15:34:45,948:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 15:34:46,025:[predict.py:747 - predict() ] Elapsed Time: 254.23103666305542 secs INFO:2026-07-10 15:34:46,025:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 15:34:46,025:[predict.py:753 - predict() ] predictions shape - (222, 1000, 2) INFO:2026-07-10 15:34:46,028:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 15:34:47,245:[predict.py:801 - predict() ] min max median INFO:2026-07-10 15:34:47,245:[predict.py:806 - predict() ] mnll 0.000 0.066 0.008 INFO:2026-07-10 15:34:47,245:[predict.py:811 - predict() ] cross_entropy 0.000 0.066 0.008 INFO:2026-07-10 15:34:47,245:[predict.py:816 - predict() ] jsd 0.108 0.425 0.251 INFO:2026-07-10 15:34:47,245:[predict.py:821 - predict() ] spearman -0.306 0.525 0.103 INFO:2026-07-10 15:34:47,245:[predict.py:826 - predict() ] pearson -0.387 0.596 0.135 INFO:2026-07-10 15:34:47,245:[predict.py:831 - predict() ] mse 0.013 1.379 0.034 INFO:2026-07-10 15:34:47,245:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 15:34:47,324:[predict.py:848 - predict() ] counts pearson: [0.59505535 0.58705237] INFO:2026-07-10 15:34:47,324:[predict.py:849 - predict() ] counts spearman: [0.46640323 0.45864917]