INFO:2026-07-09 23:51:44,552:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-09 23:51:44,594:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 35 samples) - 13824 INFO:2026-07-09 23:51:44,600:[predict.py:460 - predict() ] Writing predictions to predictions/AML1-ETO/fold_4/model_split000_predictions.h5 DEBUG:2026-07-09 23:51:44,713:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (6912, 3) sum(num_batches) 108 DEBUG:2026-07-09 23:51:44,784:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (6912, 3) sum(num_batches) 216 DEBUG:2026-07-09 23:51:44,820:[generators.py:757 - _epoch_run() ] test num_batches list [108, 108] DEBUG:2026-07-09 23:51:44,821:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [108] DEBUG:2026-07-09 23:51:44,821:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [108] DEBUG:2026-07-09 23:52:09,397:[generators.py:652 - _proc_target() ] test process 0 put 108 batches into mpq DEBUG:2026-07-09 23:52:09,507:[generators.py:676 - _stealer() ] test stealer thread 0 got 108 batches from mpq DEBUG:2026-07-09 23:52:10,382:[generators.py:652 - _proc_target() ] test process 1 put 108 batches into mpq DEBUG:2026-07-09 23:52:10,500:[generators.py:676 - _stealer() ] test stealer thread 1 got 108 batches from mpq DEBUG:2026-07-09 23:54:17,744:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-09 23:54:17,744:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-09 23:54:17,744:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-09 23:54:17,744:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-09 23:54:17,745:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-09 23:54:17,745:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-09 23:54:17,745:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-09 23:54:17,745:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-09 23:54:17,745:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-09 23:54:25,600:[predict.py:747 - predict() ] Elapsed Time: 160.99720549583435 secs INFO:2026-07-09 23:54:25,600:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-09 23:54:25,600:[predict.py:753 - predict() ] predictions shape - (13789, 1000, 2) INFO:2026-07-09 23:54:25,609:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-09 23:55:07,839:[predict.py:801 - predict() ] min max median INFO:2026-07-09 23:55:07,839:[predict.py:806 - predict() ] mnll 0.000 0.774 0.237 INFO:2026-07-09 23:55:07,840:[predict.py:811 - predict() ] cross_entropy 0.000 0.774 0.237 INFO:2026-07-09 23:55:07,841:[predict.py:816 - predict() ] jsd 0.054 0.838 0.565 INFO:2026-07-09 23:55:07,841:[predict.py:821 - predict() ] spearman -0.411 0.986 0.780 INFO:2026-07-09 23:55:07,842:[predict.py:826 - predict() ] pearson -0.610 0.974 0.697 INFO:2026-07-09 23:55:07,842:[predict.py:831 - predict() ] mse 0.010 9.373 0.102 INFO:2026-07-09 23:55:07,842:[predict.py:833 - predict() ] ============================================== INFO:2026-07-09 23:55:07,883:[predict.py:848 - predict() ] counts pearson: [0.59377031 0.59439619] INFO:2026-07-09 23:55:07,884:[predict.py:849 - predict() ] counts spearman: [0.57491981 0.57686744] INFO:2026-07-10 15:25:11,499:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 15:25:11,557:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 35 samples) - 13824 INFO:2026-07-10 15:25:11,614:[predict.py:460 - predict() ] Writing predictions to predictions/AML1-ETO/fold_4/model_split000_predictions.h5 DEBUG:2026-07-10 15:25:11,678:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (6912, 3) sum(num_batches) 108 DEBUG:2026-07-10 15:25:11,716:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (6912, 3) sum(num_batches) 216 DEBUG:2026-07-10 15:25:11,737:[generators.py:757 - _epoch_run() ] test num_batches list [108, 108] DEBUG:2026-07-10 15:25:11,738:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [108] DEBUG:2026-07-10 15:25:11,738:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [108] DEBUG:2026-07-10 15:25:40,194:[generators.py:652 - _proc_target() ] test process 0 put 108 batches into mpq DEBUG:2026-07-10 15:25:40,216:[generators.py:676 - _stealer() ] test stealer thread 0 got 108 batches from mpq DEBUG:2026-07-10 15:25:40,445:[generators.py:652 - _proc_target() ] test process 1 put 108 batches into mpq DEBUG:2026-07-10 15:25:40,517:[generators.py:676 - _stealer() ] test stealer thread 1 got 108 batches from mpq DEBUG:2026-07-10 15:27:24,227:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 15:27:24,227:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 15:27:24,227:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 15:27:24,227:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 15:27:24,227:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 15:27:24,227:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 15:27:24,227:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 15:27:24,227:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 15:27:24,228:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 15:27:33,256:[predict.py:747 - predict() ] Elapsed Time: 141.63632583618164 secs INFO:2026-07-10 15:27:33,256:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 15:27:33,257:[predict.py:753 - predict() ] predictions shape - (13789, 1000, 2) INFO:2026-07-10 15:27:33,265:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 15:28:21,846:[predict.py:801 - predict() ] min max median INFO:2026-07-10 15:28:21,847:[predict.py:806 - predict() ] mnll 0.000 0.767 0.234 INFO:2026-07-10 15:28:21,848:[predict.py:811 - predict() ] cross_entropy 0.000 0.767 0.235 INFO:2026-07-10 15:28:21,849:[predict.py:816 - predict() ] jsd 0.067 0.832 0.559 INFO:2026-07-10 15:28:21,850:[predict.py:821 - predict() ] spearman -0.400 0.985 0.775 INFO:2026-07-10 15:28:21,851:[predict.py:826 - predict() ] pearson -0.473 0.969 0.696 INFO:2026-07-10 15:28:21,852:[predict.py:831 - predict() ] mse 0.011 9.399 0.102 INFO:2026-07-10 15:28:21,852:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 15:28:21,964:[predict.py:848 - predict() ] counts pearson: [0.56791444 0.56794964] INFO:2026-07-10 15:28:21,965:[predict.py:849 - predict() ] counts spearman: [0.54908567 0.54923834]