INFO:2026-07-10 00:13:41,972:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 00:13:42,020:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 35 samples) - 13824 INFO:2026-07-10 00:13:43,332:[predict.py:460 - predict() ] Writing predictions to predictions/AML1-ETO/fold_2/model_split000_predictions.h5 DEBUG:2026-07-10 00:13:43,927:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (6912, 3) sum(num_batches) 108 DEBUG:2026-07-10 00:13:43,961:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (6912, 3) sum(num_batches) 216 DEBUG:2026-07-10 00:13:43,988:[generators.py:757 - _epoch_run() ] test num_batches list [108, 108] DEBUG:2026-07-10 00:13:43,988:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [108] DEBUG:2026-07-10 00:13:43,997:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [108] DEBUG:2026-07-10 00:14:14,184:[generators.py:676 - _stealer() ] test stealer thread 0 got 108 batches from mpq DEBUG:2026-07-10 00:14:14,165:[generators.py:652 - _proc_target() ] test process 0 put 108 batches into mpq DEBUG:2026-07-10 00:14:15,315:[generators.py:652 - _proc_target() ] test process 1 put 108 batches into mpq DEBUG:2026-07-10 00:14:15,370:[generators.py:676 - _stealer() ] test stealer thread 1 got 108 batches from mpq DEBUG:2026-07-10 00:16:18,790:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 00:16:18,790:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 00:16:18,790:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 00:16:18,790:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 00:16:18,790:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 00:16:18,790:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 00:16:18,791:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 00:16:18,791:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 00:16:18,791:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 00:16:28,756:[predict.py:747 - predict() ] Elapsed Time: 165.42005825042725 secs INFO:2026-07-10 00:16:28,756:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 00:16:28,756:[predict.py:753 - predict() ] predictions shape - (13789, 1000, 2) INFO:2026-07-10 00:16:28,764:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 00:17:18,849:[predict.py:801 - predict() ] min max median INFO:2026-07-10 00:17:18,850:[predict.py:806 - predict() ] mnll 0.000 0.774 0.235 INFO:2026-07-10 00:17:18,851:[predict.py:811 - predict() ] cross_entropy 0.000 0.774 0.235 INFO:2026-07-10 00:17:18,851:[predict.py:816 - predict() ] jsd 0.071 0.835 0.563 INFO:2026-07-10 00:17:18,852:[predict.py:821 - predict() ] spearman -0.343 0.983 0.778 INFO:2026-07-10 00:17:18,852:[predict.py:826 - predict() ] pearson -0.611 0.970 0.698 INFO:2026-07-10 00:17:18,853:[predict.py:831 - predict() ] mse 0.011 8.565 0.103 INFO:2026-07-10 00:17:18,853:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 00:17:18,879:[predict.py:848 - predict() ] counts pearson: [0.60535344 0.60550709] INFO:2026-07-10 00:17:18,880:[predict.py:849 - predict() ] counts spearman: [0.5764284 0.57514161] INFO:2026-07-10 15:53:31,278:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 15:53:31,324:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 35 samples) - 13824 INFO:2026-07-10 15:53:31,576:[predict.py:460 - predict() ] Writing predictions to predictions/AML1-ETO/fold_2/model_split000_predictions.h5 DEBUG:2026-07-10 15:53:31,594:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (6912, 3) sum(num_batches) 108 DEBUG:2026-07-10 15:53:31,614:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (6912, 3) sum(num_batches) 216 DEBUG:2026-07-10 15:53:31,628:[generators.py:757 - _epoch_run() ] test num_batches list [108, 108] DEBUG:2026-07-10 15:53:31,637:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [108] DEBUG:2026-07-10 15:53:31,652:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [108] DEBUG:2026-07-10 15:54:23,874:[generators.py:676 - _stealer() ] test stealer thread 1 got 108 batches from mpq DEBUG:2026-07-10 15:54:23,864:[generators.py:652 - _proc_target() ] test process 1 put 108 batches into mpq DEBUG:2026-07-10 15:54:23,915:[generators.py:676 - _stealer() ] test stealer thread 0 got 108 batches from mpq DEBUG:2026-07-10 15:54:23,905:[generators.py:652 - _proc_target() ] test process 0 put 108 batches into mpq DEBUG:2026-07-10 15:55:38,712:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 15:55:38,712:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 15:55:38,712:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 15:55:38,712:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 15:55:38,712:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 15:55:38,712:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 15:55:38,712:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 15:55:38,712:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 15:55:38,713:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 15:55:47,412:[predict.py:747 - predict() ] Elapsed Time: 135.8326449394226 secs INFO:2026-07-10 15:55:47,412:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 15:55:47,412:[predict.py:753 - predict() ] predictions shape - (13789, 1000, 2) INFO:2026-07-10 15:55:47,418:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 15:56:27,859:[predict.py:801 - predict() ] min max median INFO:2026-07-10 15:56:27,859:[predict.py:806 - predict() ] mnll 0.000 0.772 0.234 INFO:2026-07-10 15:56:27,860:[predict.py:811 - predict() ] cross_entropy 0.000 0.772 0.235 INFO:2026-07-10 15:56:27,860:[predict.py:816 - predict() ] jsd 0.071 0.842 0.564 INFO:2026-07-10 15:56:27,861:[predict.py:821 - predict() ] spearman -0.363 0.984 0.777 INFO:2026-07-10 15:56:27,861:[predict.py:826 - predict() ] pearson -0.538 0.974 0.701 INFO:2026-07-10 15:56:27,862:[predict.py:831 - predict() ] mse 0.011 8.482 0.104 INFO:2026-07-10 15:56:27,862:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 15:56:28,067:[predict.py:848 - predict() ] counts pearson: [0.58162716 0.58109276] INFO:2026-07-10 15:56:28,067:[predict.py:849 - predict() ] counts spearman: [0.55375652 0.55410922]