INFO:2026-07-10 00:13:10,997:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 00:13:11,029:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 35 samples) - 13824 INFO:2026-07-10 00:13:11,033:[predict.py:460 - predict() ] Writing predictions to predictions/AML1-ETO/fold_1/model_split000_predictions.h5 DEBUG:2026-07-10 00:13:11,046:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (6912, 3) sum(num_batches) 108 DEBUG:2026-07-10 00:13:11,075:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (6912, 3) sum(num_batches) 216 DEBUG:2026-07-10 00:13:11,098:[generators.py:757 - _epoch_run() ] test num_batches list [108, 108] DEBUG:2026-07-10 00:13:11,098:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [108] DEBUG:2026-07-10 00:13:11,099:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [108] DEBUG:2026-07-10 00:13:31,655:[generators.py:676 - _stealer() ] test stealer thread 0 got 108 batches from mpq DEBUG:2026-07-10 00:13:31,640:[generators.py:652 - _proc_target() ] test process 0 put 108 batches into mpq DEBUG:2026-07-10 00:13:32,588:[generators.py:652 - _proc_target() ] test process 1 put 108 batches into mpq DEBUG:2026-07-10 00:13:32,615:[generators.py:676 - _stealer() ] test stealer thread 1 got 108 batches from mpq DEBUG:2026-07-10 00:14:54,208:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 00:14:54,208:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 00:14:54,208:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 00:14:54,208:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 00:14:54,208:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 00:14:54,208:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 00:14:54,208:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 00:14:54,208:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 00:14:54,209:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 00:15:00,843:[predict.py:747 - predict() ] Elapsed Time: 109.80750012397766 secs INFO:2026-07-10 00:15:00,843:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 00:15:00,843:[predict.py:753 - predict() ] predictions shape - (13789, 1000, 2) INFO:2026-07-10 00:15:00,847:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 00:15:34,933:[predict.py:801 - predict() ] min max median INFO:2026-07-10 00:15:34,933:[predict.py:806 - predict() ] mnll 0.000 0.769 0.232 INFO:2026-07-10 00:15:34,934:[predict.py:811 - predict() ] cross_entropy 0.000 0.770 0.233 INFO:2026-07-10 00:15:34,934:[predict.py:816 - predict() ] jsd 0.053 0.837 0.557 INFO:2026-07-10 00:15:34,935:[predict.py:821 - predict() ] spearman -0.425 0.983 0.775 INFO:2026-07-10 00:15:34,935:[predict.py:826 - predict() ] pearson -0.624 0.972 0.697 INFO:2026-07-10 00:15:34,936:[predict.py:831 - predict() ] mse 0.011 9.682 0.102 INFO:2026-07-10 00:15:34,936:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 00:15:34,955:[predict.py:848 - predict() ] counts pearson: [0.5539728 0.55553144] INFO:2026-07-10 00:15:34,956:[predict.py:849 - predict() ] counts spearman: [0.52634011 0.52921748] INFO:2026-07-10 15:58:49,291:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-07-10 15:58:49,344:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 35 samples) - 13824 INFO:2026-07-10 15:58:49,386:[predict.py:460 - predict() ] Writing predictions to predictions/AML1-ETO/fold_1/model_split000_predictions.h5 DEBUG:2026-07-10 15:58:49,403:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (6912, 3) sum(num_batches) 108 DEBUG:2026-07-10 15:58:49,430:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (6912, 3) sum(num_batches) 216 DEBUG:2026-07-10 15:58:49,462:[generators.py:757 - _epoch_run() ] test num_batches list [108, 108] DEBUG:2026-07-10 15:58:49,463:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [108] DEBUG:2026-07-10 15:58:49,472:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [108] DEBUG:2026-07-10 15:59:55,004:[generators.py:676 - _stealer() ] test stealer thread 0 got 108 batches from mpq DEBUG:2026-07-10 15:59:54,978:[generators.py:652 - _proc_target() ] test process 0 put 108 batches into mpq DEBUG:2026-07-10 15:59:55,855:[generators.py:652 - _proc_target() ] test process 1 put 108 batches into mpq DEBUG:2026-07-10 15:59:55,873:[generators.py:676 - _stealer() ] test stealer thread 1 got 108 batches from mpq DEBUG:2026-07-10 16:01:10,937:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-07-10 16:01:10,937:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-07-10 16:01:10,937:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-07-10 16:01:10,937:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-07-10 16:01:10,937:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-07-10 16:01:10,937:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-07-10 16:01:10,937:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-07-10 16:01:10,937:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-07-10 16:01:10,938:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-07-10 16:01:19,117:[predict.py:747 - predict() ] Elapsed Time: 149.7257900238037 secs INFO:2026-07-10 16:01:19,117:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-07-10 16:01:19,117:[predict.py:753 - predict() ] predictions shape - (13789, 1000, 2) INFO:2026-07-10 16:01:19,126:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-07-10 16:02:05,099:[predict.py:801 - predict() ] min max median INFO:2026-07-10 16:02:05,100:[predict.py:806 - predict() ] mnll 0.000 0.763 0.234 INFO:2026-07-10 16:02:05,102:[predict.py:811 - predict() ] cross_entropy 0.000 0.763 0.234 INFO:2026-07-10 16:02:05,103:[predict.py:816 - predict() ] jsd 0.066 0.838 0.561 INFO:2026-07-10 16:02:05,105:[predict.py:821 - predict() ] spearman -0.406 0.981 0.776 INFO:2026-07-10 16:02:05,106:[predict.py:826 - predict() ] pearson -0.526 0.975 0.700 INFO:2026-07-10 16:02:05,108:[predict.py:831 - predict() ] mse 0.011 9.210 0.101 INFO:2026-07-10 16:02:05,108:[predict.py:833 - predict() ] ============================================== INFO:2026-07-10 16:02:06,583:[predict.py:848 - predict() ] counts pearson: [0.59715125 0.59717713] INFO:2026-07-10 16:02:06,583:[predict.py:849 - predict() ] counts spearman: [0.57378027 0.57548944]