INFO:2026-04-13 17:25:23,262:[predict.py:399 - predict() ] SEQGEN Class Name: MBPNetSequenceGenerator INFO:2026-04-13 17:25:23,343:[generators.py:483 - _pad_samples() ] mode 'test': Data size (after padding 32 samples) - 8192 INFO:2026-04-13 17:25:23,349:[predict.py:460 - predict() ] Writing predictions to predictions/Nalm6_RUNX1/fold_0/model_split000_predictions.h5 DEBUG:2026-04-13 17:25:23,373:[generators.py:731 - _epoch_run() ] test spawning process 0, df size (4096, 3) sum(num_batches) 64 DEBUG:2026-04-13 17:25:23,444:[generators.py:731 - _epoch_run() ] test spawning process 1, df size (4096, 3) sum(num_batches) 128 DEBUG:2026-04-13 17:25:23,490:[generators.py:757 - _epoch_run() ] test num_batches list [64, 64] DEBUG:2026-04-13 17:25:23,491:[generators.py:770 - _epoch_run() ] test starting stealer thread 0 [64] DEBUG:2026-04-13 17:25:23,492:[generators.py:770 - _epoch_run() ] test starting stealer thread 1 [64] DEBUG:2026-04-13 17:25:38,505:[generators.py:652 - _proc_target() ] test process 0 put 64 batches into mpq DEBUG:2026-04-13 17:25:38,555:[generators.py:676 - _stealer() ] test stealer thread 0 got 64 batches from mpq DEBUG:2026-04-13 17:25:40,881:[generators.py:652 - _proc_target() ] test process 1 put 64 batches into mpq DEBUG:2026-04-13 17:25:40,915:[generators.py:676 - _stealer() ] test stealer thread 1 got 64 batches from mpq DEBUG:2026-04-13 17:26:15,862:[generators.py:814 - gen() ] test waiting to join process 0 DEBUG:2026-04-13 17:26:15,863:[generators.py:819 - gen() ] test waiting to join thread 0 DEBUG:2026-04-13 17:26:15,863:[generators.py:823 - gen() ] test join complete for process 0 DEBUG:2026-04-13 17:26:15,863:[generators.py:814 - gen() ] test waiting to join process 1 DEBUG:2026-04-13 17:26:15,864:[generators.py:819 - gen() ] test waiting to join thread 1 DEBUG:2026-04-13 17:26:15,864:[generators.py:823 - gen() ] test join complete for process 1 DEBUG:2026-04-13 17:26:15,864:[generators.py:826 - gen() ] test Finished join for epoch DEBUG:2026-04-13 17:26:15,864:[generators.py:828 - gen() ] test Ready for next epoch INFO:2026-04-13 17:26:15,864:[predict.py:731 - predict() ] Writing to h5 file ... INFO:2026-04-13 17:26:20,306:[predict.py:747 - predict() ] Elapsed Time: 56.955323934555054 secs INFO:2026-04-13 17:26:20,307:[predict.py:751 - predict() ] Generating predicted profile bigWigs ... INFO:2026-04-13 17:26:20,307:[predict.py:753 - predict() ] predictions shape - (8160, 1000, 2) INFO:2026-04-13 17:26:20,318:[predict.py:775 - predict() ] bigWig HEADER - [('chr1', 248956422), ('chr10', 133797422), ('chr11', 135086622), ('chr12', 133275309), ('chr13', 114364328), ('chr14', 107043718), ('chr15', 101991189), ('chr16', 90338345), ('chr17', 83257441), ('chr18', 80373285), ('chr19', 58617616), ('chr2', 242193529), ('chr20', 64444167), ('chr21', 46709983), ('chr22', 50818468), ('chr3', 198295559), ('chr4', 190214555), ('chr5', 181538259), ('chr6', 170805979), ('chr7', 159345973), ('chr8', 145138636), ('chr9', 138394717), ('chrM', 16569), ('chrX', 156040895), ('chrY', 57227415)] INFO:2026-04-13 17:26:41,083:[predict.py:801 - predict() ] min max median INFO:2026-04-13 17:26:41,087:[predict.py:806 - predict() ] mnll 0.000 0.532 0.123 INFO:2026-04-13 17:26:41,088:[predict.py:811 - predict() ] cross_entropy 0.000 0.532 0.123 INFO:2026-04-13 17:26:41,089:[predict.py:816 - predict() ] jsd 0.116 0.791 0.523 INFO:2026-04-13 17:26:41,090:[predict.py:821 - predict() ] spearman -0.511 0.954 0.641 INFO:2026-04-13 17:26:41,091:[predict.py:826 - predict() ] pearson -0.742 0.926 0.596 INFO:2026-04-13 17:26:41,092:[predict.py:831 - predict() ] mse 0.019 1.241 0.101 INFO:2026-04-13 17:26:41,092:[predict.py:833 - predict() ] ============================================== INFO:2026-04-13 17:26:41,468:[predict.py:848 - predict() ] counts pearson: [0.36001021 0.35891305] INFO:2026-04-13 17:26:41,468:[predict.py:849 - predict() ] counts spearman: [0.37101619 0.3678621 ]