#!/bin/bash
#SBATCH -p akundaje,owners
#SBATCH -t 03:00:00
#SBATCH -c 32
#SBATCH --mem=64G
#SBATCH -G 1
#SBATCH --requeue

export DATA_DIR=$1
export MODEL_NAME=$2
export FOLD=$3
export GPU=$4

# Initialize conda for this non-interactive shell
eval "$(conda shell.bash hook)"
conda activate bpnet
module load biology
module load samtools
module load ucsc-utils

bash bpnet_training_native_model.sh $DATA_DIR $MODEL_NAME $FOLD $GPU
bash bpnet_predict_native_model.sh $DATA_DIR $MODEL_NAME $FOLD $GPU
bash bpnet_predict_native_model_with_bias.sh $DATA_DIR $MODEL_NAME $FOLD $GPU
bash bpnet_contributions_native_model.sh $DATA_DIR $MODEL_NAME $FOLD $GPU
# bash bpnet_contributions_native_model_with_bias.sh $DATA_DIR $MODEL_NAME $FOLD $GPU