Information for 3-GGGGGCTGTTCT (Motif 8)


Reverse Opposite:

p-value:1e-4
log p-value:-9.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.0 +/- 44.9bp
Average Position of motif in Background131.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGCTGTTCT-
GGNGCGNCTGTTNNN

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCTGTTCT
NNNAAGGGGGCGGGNNN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGGGGCTGTTCT---
-----CTGTTCCTGG

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCTGTTCT
ANTGCGGGGGCGGN---

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGGGCTGTTCT
---GGCVGTTR-

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGGCTGTTCT
ATTTTNGGGGGGCNN----

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGGGCTGTTCT
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCTGTTCT-
AGGGGGCGGGGCTG

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGGGGCTGTTCT
----GCTGTG--

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGGGGCTGTTCT-----
--GTNTTGTTGTGANNT