Information for 24-CTGTGCACAG (Motif 36)


Reverse Opposite:

p-value:1e-2
log p-value:-6.248e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif39.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets121.5 +/- 44.9bp
Average Position of motif in Background124.3 +/- 67.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGCACAG---
NNGTATGTGCACATNNN

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CTGTGCACAG----
TACATGTGCACATAAAA

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTGTGCACAG-
-----CACAGN

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTGTGCACAG-
GGGCCGTGTGCAAAAA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGTGCACAG
CCAGGAACAG

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGCACAG----
NNNNTGAGCACTGTNNG

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTGTGCACAG---
NNNVCTGWGYAAACASN

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGCACAG-
SCTGTCARCACC

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CTGTGCACAG
NNTCCTGCTGTGNNN--

MA0480.1_Foxo1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGTGCACAG
TCCTGTTTACA-