Information for 23-CGGGGGGGGC (Motif 35)


Reverse Opposite:

p-value:1e-2
log p-value:-6.579e+00
Information Content per bp:1.955
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif28.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets125.3 +/- 47.6bp
Average Position of motif in Background112.6 +/- 66.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.84
Offset:1
Orientation:forward strand
Alignment:CGGGGGGGGC
-GGGGGGGG-

MA0162.2_EGR1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CGGGGGGGGC--
GGCGGGGGCGGGGG

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGGGGGC
ANTGCGGGGGCGGN

PB0100.1_Zfp740_1/Jaspar

Match Rank:4
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGGGGGC--
NANNTGGGGGGGGNGN

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGGGGGGGGC
GGGGNGGGGC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGGGGGGGGC
TGGGTGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGGGGGGGGC
DGGGYGKGGC

PB0097.1_Zfp281_1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGGGGGGGGC---
GGGGGGGGGGGGGGA

MA0079.3_SP1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGGGGGGGGC--
-GGGGGCGGGGC

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGGGGGGGGC-
GGGGGCGGGGCC