Information for 25-CAGGTGGGCGGG (Motif 32)


Reverse Opposite:

p-value:1e-3
log p-value:-7.272e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets109.0 +/- 56.0bp
Average Position of motif in Background91.4 +/- 70.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)7.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CAGGTGGGCGGG
CAGGTGAGG---

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGGCGGG---
NNNAAGGGGGCGGGNNN

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGGCGGG
NNCAGGTGNN----

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CAGGTGGGCGGG-----
NAGANTGGCGGGGNGNA

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAGGTGGGCGGG
NGCGTGGGCGGR

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGGGCGGG--
GGGNGGGGGCGGGGC

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CAGGTGGGCGGG--
---GGGGGCGGGGC

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGGTGGGCGGG-----
-NNAGGGGCGGGGTNNA

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAGGTGGGCGGG---
---GGGGGCGGGGCC

MA0599.1_KLF5/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAGGTGGGCGGG--
----GGGGNGGGGC