Information for 15-TGTTGACAAT (Motif 31)


Reverse Opposite:

p-value:1e-3
log p-value:-7.713e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets177.0 +/- 0.0bp
Average Position of motif in Background104.8 +/- 80.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGTTGACAAT
GGTGYTGACAGS

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGTTGACAAT
CNTGTTTACATA

MA0078.1_Sox17/Jaspar

Match Rank:3
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TGTTGACAAT---
----GACAATGNN

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTGACAAT--
NNNTTTGTTTACATTTN

PB0109.1_Bbx_2/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTGACAAT--
NNNNCTGTTAACNNTNN

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGTTGACAAT
CTGTTTAC---

MA0084.1_SRY/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TGTTGACAAT
-GTAAACAAT

MA0047.2_Foxa2/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGTTGACAAT--
TGTTTACTTAGG

MA0480.1_Foxo1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGTTGACAAT
TCCTGTTTACA--

PB0019.1_Foxl1_1/Jaspar

Match Rank:10
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTGACAAT--
NNNTTTGTTTACATTTN