Information for 13-GTATGAGATT (Motif 30)


Reverse Opposite:

p-value:1e-3
log p-value:-7.713e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background89.4 +/- 73.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GTATGAGATT-
ACCCGTATCAAATTT

MA0038.1_Gfi1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTATGAGATT--
--CNGTGATTTN

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTATGAGATT---
TTGAATGAAATTCGA

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTATGAGATT-----
TATTATGGGATGGATAA

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GTATGAGATT-
NAATTTTACGAGNTNN

MA0483.1_Gfi1b/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTATGAGATT-
TGCTGTGATTT

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTATGAGATT--
----RGGATTAR

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTATGAGATT--
GKVTCADRTTWC

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GTATGAGATT-
GAAAAGGTGTGAAAATT

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTATGAGATT
-CATGAC---