Information for 8-CATACACTTG (Motif 27)


Reverse Opposite:

p-value:1e-3
log p-value:-8.524e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets165.0 +/- 0.0bp
Average Position of motif in Background68.9 +/- 101.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATACACTTG-----
TAAGCCACTTGAAATT

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CATACACTTG
ATTTGCATACAATGG

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATACACTTG------
ATAACCACTTGAAAATT

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CATACACTTG--
--NNCACCTGNN

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CATACACTTG-
--NCCACTTAN

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATACACTTG-
-AAGCACATGG

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATACACTTG-----
TAAGCCACTTGAATTT

MA0058.2_MAX/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATACACTTG-
-AAGCACATGG

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATACACTTG-----
TAAGCCACTTAACATT

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CATACACTTG--
----CACGTGNC