Information for 7-CGTTACAGGT (Motif 26)


Reverse Opposite:

p-value:1e-3
log p-value:-8.524e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.0 +/- 56.0bp
Average Position of motif in Background56.0 +/- 39.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)7.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGTTACAGGT---
---NNCAGGTGNN

MA0103.2_ZEB1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CGTTACAGGT----
-----CAGGTGAGG

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTTACAGGT----
GGATTGACAGGTCNTT

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTTACAGGT----
NTATTGACAGGTNNTN

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTTACAGGT-----
NNTATTACATGTANNNT

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTTACAGGT-----
ANTNTTACATGTATNTA

MA0498.1_Meis1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CGTTACAGGT
NNNTGAGTGACAGCT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGTTACAGGT-------
ATCCACAGGTGCGAAAA

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTTACAGGT-----
NNTTTTACATGTANNNT

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGTTACAGGT----
NNATTGACAGGTGCTT