Information for 24-GTGTGGCTGTGC (Motif 25)


Reverse Opposite:

p-value:1e-3
log p-value:-8.812e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 44.9bp
Average Position of motif in Background85.9 +/- 38.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGGCTGTGC--
GGNGCGNCTGTTNNN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGGCTGTGC
TGGGTGTGGC-----

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTGTGGCTGTGC
NTGGGTGTGGCC----

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GTGTGGCTGTGC
-----GCTGTG-

MA0472.1_EGR2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGCTGTGC-
GTGCGTGGGCGGGNG

MA0493.1_Klf1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGGCTGTGC
TGGGTGTGGCN----

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGCTGTGC
NNHTGTGGTTWN--

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGCTGTGC
TGCGTGGGYG---

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGCTGTGC
NGCGTGGGCGGR-

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGTGGCTGTGC
GTCTGTGGTTT---