Information for 23-CTGTGTGCTGTC (Motif 24)


Reverse Opposite:

p-value:1e-4
log p-value:-9.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets103.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTGCTGTC
NNGCGTGTGTGCNGCN

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTGCTGTC
NNNNTTGTGTGCTTNN

MA0498.1_Meis1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTGTGTGCTGTC--------
-----AGCTGTCACTCACCT

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTGCTGTC
GCTGTG-------

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTGCTGTC----
NSTGTTTRCWCAGBNNN

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTGTGTGCTGTC---
-----TGCTGACTCA

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTGTGCTGTC------
-NNNCAGCTGTCAATATN

MA0442.1_SOX10/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGTGTGCTGTC
CTTTGT------

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGTGTGCTGTC-----
AAATTTGCTGACTTAGA

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGTGTGCTGTC-----
-AAAGACCTGTCAATCC