Information for 20-GGGAAGCTGCAC (Motif 22)


Reverse Opposite:

p-value:1e-4
log p-value:-9.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGAAGCTGCAC
-NGAAGC-----

MA0500.1_Myog/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGAAGCTGCAC
-GACAGCTGCAG

MA0499.1_Myod1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAGCTGCAC
NGNGACAGCTGCN-

MA0521.1_Tcf12/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGAAGCTGCAC
-AACAGCTGCAG

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGAAGCTGCAC-
-AGCAGCTGCTNN

MA0522.1_Tcf3/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGAAGCTGCAC
-CACAGCTGCAG

MA0048.1_NHLH1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGAAGCTGCAC
GCGCAGCTGCGT

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGAAGCTGCAC
NNACAGCTGC--

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGAAGCTGCAC---
CTCAGCAGCTGCTACTG

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGGAAGCTGCAC
---CAGCTGNT-