Information for 19-TGGGGAGCTCTC (Motif 21)


Reverse Opposite:

p-value:1e-4
log p-value:-9.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background181.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGGGAGCTCTC
TGGGGA------

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGGGGAGCTCTC
--CGGAGC----

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGGGGAGCTCTC
--GGGAGGACNG

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGAGCTCTC----
NNNNTGAGCACTGTNNG

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGGGAGCTCTC--
NNNGGGGCGCCCCCNN

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGGGGAGCTCTC------
---NNAATTCTCGNTNAN

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGGAGCTCTC
ATTTTNGGGGGGCNN--

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGGGAGCTCTC--
----AASCACTCAA

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGGGGAGCTCTC
NGGGGATTTCCC

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGGAGCTCTC
NNNATTGGGGGTNTCCT