Information for 18-AGCGAGATGGGG (Motif 20)


Reverse Opposite:

p-value:1e-4
log p-value:-9.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGCGAGATGGGG--
--CAAGATGGCGGC

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGCGAGATGGGG
NNNACCGAGAGTNNN

MA0095.2_YY1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGCGAGATGGGG--
--CAAGATGGCGGC

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCGAGATGGGG
-AACAGATGGC-

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCGAGATGGGG
TTGACCGAGAATTCC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AGCGAGATGGGG-
-------TGGGGA

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGCGAGATGGGG
GNNACCGAGAATNNN

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCGAGATGGGG---
AAGGCCAGATGGTCCGG

MA0057.1_MZF1_5-13/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGCGAGATGGGG--
----GGAGGGGGAA

MA0527.1_ZBTB33/Jaspar

Match Rank:10
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------AGCGAGATGGGG
NAGNTCTCGCGAGAN----