Information for 14-AGTAACATCAAA (Motif 16)


Reverse Opposite:

p-value:1e-4
log p-value:-9.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background128.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0523.1_TCF7L2/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGTAACATCAAA----
--AAAGATCAAAGGAA

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AGTAACATCAAA----
----ACATCAAAGGNA

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AGTAACATCAAA--
----ACWTCAAAGG

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AGTAACATCAAA--
----ACATCAAAGG

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGTAACATCAAA------
-NANAGATCAAAGGGNNN

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGTAACATCAAA------
-TATAGATCAAAGGAAAA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGTAACATCAAA------
-NNNAGATCAAAGGANNN

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGTAACATCAAA------
-TATAGATCAAAGGAAAA

MA0151.1_ARID3A/Jaspar

Match Rank:9
Score:0.63
Offset:6
Orientation:forward strand
Alignment:AGTAACATCAAA
------ATTAAA

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGTAACATCAAA
ADGGYAGYAGCATCT--