Information for 11-ATATAATGTTCC (Motif 13)


Reverse Opposite:

p-value:1e-4
log p-value:-9.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATATAATGTTCC---
AANTTATTGTTCTNNA

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATATAATGTTCC---
NNTTTATTGTTCTNNN

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ATATAATGTTCC
TATAATTATAATATTC-

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATATAATGTTCC---
GTATCTATTGTTCTTTA

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATATAATGTTCC----
AATCAATTGTTCCGCTA

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATATAATGTTCC-
GRACAGWMTGTYCTB

MA0007.2_AR/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATATAATGTTCC-
GNACANNNTGTTCTT

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ATATAATGTTCC---
-----CTGTTCCTGG

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATATAATGTTCC---
ANNTCTATTGTTCNNNA

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATATAATGTTCC
NAGNACANNNTGTNCT