Information for 10-GGACATGAAATC (Motif 12)


Reverse Opposite:

p-value:1e-4
log p-value:-9.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGACATGAAATC
-NACAGGAAAT-

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGACATGAAATC
-NACAGGAAAT-

PH0056.1_Hoxa9/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGACATGAAATC---
ACGGCCATAAAATTAAT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGACATGAAATC
CGGAAGTGAAAC-

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGACATGAAATC
-AACAGGAAGT-

MA0156.1_FEV/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGACATGAAATC
---CAGGAAAT-

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGACATGAAATC-
TAAGGTAATAAAATTA

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGACATGAAATC--
--AGATGCAATCCC

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGACATGAAATC--
AGAGCCATAAAATTCG

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGACATGAAATC
--ACAGGAAGTG