Information for 7-TTCAATTTAAAC (Motif 10)


Reverse Opposite:

p-value:1e-4
log p-value:-9.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 0.0bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTCAATTTAAAC--
GGGTTTAATTAAAATTC

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTCAATTTAAAC
NNNTATTGAATTGNNN-

PB0019.1_Foxl1_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCAATTTAAAC------
-TAAATGTAAACAAAGGT

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTCAATTTAAAC------
-AAAATGTAAACAAACAG

PB0171.1_Sox18_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTCAATTTAAAC-
GGACTGAATTCATGCC

MA0047.2_Foxa2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTCAATTTAAAC-
-NCTAAGTAAACA

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTCAATTTAAAC
ACTTTCACTTTC---

MA0148.3_FOXA1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTCAATTTAAAC-----
--CAAAGTAAACANNNN

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.57
Offset:-10
Orientation:reverse strand
Alignment:----------TTCAATTTAAAC
NNCNNNCNCANACAATTAGNAC

PH0100.1_Lmx1a/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTCAATTTAAAC-
NNTTTTTAATTAATTCG